EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033542 (Gene tree)
Gene ID: -
Gene Symbol: Sltm
Alias: 5730455C01Rik|5730555F13Rik|9130215G10Rik
Full Name: SAFB-like%2C transcription modulator
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 51304 bases
Position: chr9:70239285-70290588
Accession: 1913910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0092166	RRM_5	PF13893.6	1.5e-07	1	1
MGP_SPRETEiJ_P0092166	RRM_1	PF00076.22	1.6e-10	1	1
MGP_SPRETEiJ_P0092166	SAP	PF02037.27	7.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0092165	-	776	-	MGP_SPRETEiJ_P0092165	211 (aa)	-	-
MGP_SPRETEiJ_T0092166	-	3648	-	MGP_SPRETEiJ_P0092166	1031 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0033542	Sltm	51	44.573	MGP_SPRETEiJ_G0022690	Safb2	55	39.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033542	Sltm	98	90.954	ENSG00000137776	SLTM	100	91.000	Homo_sapiens
MGP_SPRETEiJ_G0033542	Sltm	95	89.195	ENSAMEG00000004537	SLTM	59	90.138	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033542	Sltm	99	47.566	ENSACIG00000001971	sltm	99	47.042	Amphilophus_citrinellus
MGP_SPRETEiJ_G0033542	Sltm	83	49.947	ENSATEG00000003763	sltm	59	45.201	Anabas_testudineus
MGP_SPRETEiJ_G0033542	Sltm	95	75.862	ENSAPLG00000013025	SLTM	59	74.701	Anas_platyrhynchos
MGP_SPRETEiJ_G0033542	Sltm	98	69.990	ENSACAG00000015120	SLTM	59	67.670	Anolis_carolinensis
MGP_SPRETEiJ_G0033542	Sltm	98	90.167	ENSANAG00000037031	SLTM	61	89.474	Aotus_nancymaae
MGP_SPRETEiJ_G0033542	Sltm	83	49.262	ENSACLG00000002523	sltm	91	49.420	Astatotilapia_calliptera
MGP_SPRETEiJ_G0033542	Sltm	94	92.381	ENSBTAG00000011319	SLTM	55	89.773	Bos_taurus
MGP_SPRETEiJ_G0033542	Sltm	98	89.479	ENSCJAG00000020395	SLTM	61	89.474	Callithrix_jacchus
MGP_SPRETEiJ_G0033542	Sltm	99	87.182	ENSCAFG00000016586	SLTM	59	87.844	Canis_familiaris
MGP_SPRETEiJ_G0033542	Sltm	98	88.212	ENSCAFG00020011253	SLTM	95	89.465	Canis_lupus_dingo
MGP_SPRETEiJ_G0033542	Sltm	98	88.594	ENSCHIG00000008780	SLTM	59	89.431	Capra_hircus
MGP_SPRETEiJ_G0033542	Sltm	95	89.898	ENSTSYG00000013581	SLTM	56	90.988	Carlito_syrichta
MGP_SPRETEiJ_G0033542	Sltm	86	94.318	ENSCPOG00000026109	SLTM	67	89.286	Cavia_porcellus
MGP_SPRETEiJ_G0033542	Sltm	98	90.364	ENSCCAG00000022982	SLTM	61	89.474	Cebus_capucinus
MGP_SPRETEiJ_G0033542	Sltm	98	90.855	ENSCATG00000030254	SLTM	60	91.545	Cercocebus_atys
MGP_SPRETEiJ_G0033542	Sltm	91	86.123	ENSCLAG00000007160	SLTM	61	87.522	Chinchilla_lanigera
MGP_SPRETEiJ_G0033542	Sltm	98	90.757	ENSCSAG00000012004	SLTM	60	91.545	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033542	Sltm	98	78.224	ENSCPBG00000006045	SLTM	58	76.252	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033542	Sltm	95	90.816	ENSCANG00000043731	SLTM	59	91.508	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0033542	Sltm	95	47.071	ENSCSEG00000001618	sltm	58	43.214	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033542	Sltm	78	54.374	ENSDARG00000052728	sltm	91	62.000	Danio_rerio
MGP_SPRETEiJ_G0033542	Sltm	99	88.845	ENSDNOG00000002975	SLTM	59	90.244	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033542	Sltm	76	90.293	ENSDORG00000007463	Sltm	85	90.315	Dipodomys_ordii
MGP_SPRETEiJ_G0033542	Sltm	71	91.489	ENSETEG00000008003	SLTM	59	88.908	Echinops_telfairi
MGP_SPRETEiJ_G0033542	Sltm	98	90.443	ENSEASG00005006792	SLTM	60	92.033	Equus_asinus_asinus
MGP_SPRETEiJ_G0033542	Sltm	98	90.542	ENSECAG00000011267	SLTM	60	92.195	Equus_caballus
MGP_SPRETEiJ_G0033542	Sltm	86	87.407	ENSEEUG00000000580	SLTM	73	87.407	Erinaceus_europaeus
MGP_SPRETEiJ_G0033542	Sltm	99	47.913	ENSELUG00000013388	sltm	92	47.007	Esox_lucius
MGP_SPRETEiJ_G0033542	Sltm	98	90.560	ENSFCAG00000004826	SLTM	61	92.105	Felis_catus
MGP_SPRETEiJ_G0033542	Sltm	95	75.558	ENSFALG00000012285	SLTM	59	73.242	Ficedula_albicollis
MGP_SPRETEiJ_G0033542	Sltm	95	87.959	ENSFDAG00000018075	SLTM	59	89.775	Fukomys_damarensis
MGP_SPRETEiJ_G0033542	Sltm	99	48.723	ENSGACG00000015814	sltm	59	45.820	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033542	Sltm	99	77.290	ENSGAGG00000021279	SLTM	55	85.417	Gopherus_agassizii
MGP_SPRETEiJ_G0033542	Sltm	98	90.954	ENSGGOG00000015866	SLTM	67	89.474	Gorilla_gorilla
MGP_SPRETEiJ_G0033542	Sltm	83	49.156	ENSHBUG00000012461	sltm	91	49.315	Haplochromis_burtoni
MGP_SPRETEiJ_G0033542	Sltm	100	87.053	ENSHGLG00000018512	-	60	89.268	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033542	Sltm	99	72.297	ENSHGLG00000015426	-	61	81.270	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033542	Sltm	100	81.431	ENSHGLG00100002674	-	61	86.504	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033542	Sltm	99	74.734	ENSHGLG00100001757	-	62	81.068	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033542	Sltm	94	84.762	ENSHGLG00100002576	-	61	76.307	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033542	Sltm	95	90.000	ENSSTOG00000000584	SLTM	59	90.988	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033542	Sltm	99	86.732	ENSJJAG00000006970	Sltm	58	85.203	Jaculus_jaculus
MGP_SPRETEiJ_G0033542	Sltm	99	44.546	ENSKMAG00000007570	sltm	61	41.564	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0033542	Sltm	83	48.056	ENSLBEG00000025472	sltm	52	46.943	Labrus_bergylta
MGP_SPRETEiJ_G0033542	Sltm	98	86.922	ENSLAFG00000017922	SLTM	81	90.941	Loxodonta_africana
MGP_SPRETEiJ_G0033542	Sltm	98	90.855	ENSMFAG00000033354	SLTM	60	91.545	Macaca_fascicularis
MGP_SPRETEiJ_G0033542	Sltm	98	90.855	ENSMMUG00000022200	SLTM	92	91.667	Macaca_mulatta
MGP_SPRETEiJ_G0033542	Sltm	98	90.757	ENSMNEG00000025105	SLTM	60	91.382	Macaca_nemestrina
MGP_SPRETEiJ_G0033542	Sltm	98	90.659	ENSMLEG00000043355	SLTM	60	91.220	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0033542	Sltm	99	48.633	ENSMAMG00000021391	sltm	51	43.969	Mastacembelus_armatus
MGP_SPRETEiJ_G0033542	Sltm	83	49.262	ENSMZEG00005013839	sltm	91	49.420	Maylandia_zebra
MGP_SPRETEiJ_G0033542	Sltm	96	72.618	ENSMGAG00000005313	SLTM	60	70.875	Meleagris_gallopavo
MGP_SPRETEiJ_G0033542	Sltm	98	89.971	ENSMICG00000013069	SLTM	61	89.474	Microcebus_murinus
MGP_SPRETEiJ_G0033542	Sltm	92	50.476	ENSMODG00000020311	-	95	54.819	Monodelphis_domestica
MGP_SPRETEiJ_G0033542	Sltm	99	48.922	ENSMALG00000021474	sltm	51	45.298	Monopterus_albus
MGP_SPRETEiJ_G0033542	Sltm	100	98.836	MGP_CAROLIEiJ_G0032404	Sltm	100	98.836	Mus_caroli
MGP_SPRETEiJ_G0033542	Sltm	100	99.515	ENSMUSG00000032212	Sltm	100	99.515	Mus_musculus
MGP_SPRETEiJ_G0033542	Sltm	100	98.545	MGP_PahariEiJ_G0015268	Sltm	100	98.545	Mus_pahari
MGP_SPRETEiJ_G0033542	Sltm	97	86.871	ENSMPUG00000004229	SLTM	57	88.196	Mustela_putorius_furo
MGP_SPRETEiJ_G0033542	Sltm	95	87.398	ENSMLUG00000000742	SLTM	59	89.601	Myotis_lucifugus
MGP_SPRETEiJ_G0033542	Sltm	81	48.901	ENSNBRG00000010183	sltm	91	48.791	Neolamprologus_brichardi
MGP_SPRETEiJ_G0033542	Sltm	98	90.668	ENSNLEG00000011440	SLTM	60	91.220	Nomascus_leucogenys
MGP_SPRETEiJ_G0033542	Sltm	98	69.736	ENSMEUG00000015230	SLTM	59	67.152	Notamacropus_eugenii
MGP_SPRETEiJ_G0033542	Sltm	95	85.482	ENSODEG00000017077	SLTM	59	88.103	Octodon_degus
MGP_SPRETEiJ_G0033542	Sltm	100	49.067	ENSONIG00000005838	sltm	98	49.240	Oreochromis_niloticus
MGP_SPRETEiJ_G0033542	Sltm	62	74.444	ENSOANG00000012311	-	95	80.247	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0033542	Sltm	89	90.231	ENSOCUG00000003327	SLTM	65	90.355	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033542	Sltm	83	44.913	ENSORLG00000008161	sltm	99	41.985	Oryzias_latipes
MGP_SPRETEiJ_G0033542	Sltm	98	44.837	ENSORLG00020008903	sltm	99	42.366	Oryzias_latipes_hni
MGP_SPRETEiJ_G0033542	Sltm	83	45.022	ENSORLG00015007103	sltm	99	42.271	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0033542	Sltm	81	46.733	ENSOMEG00000002041	sltm	98	45.928	Oryzias_melastigma
MGP_SPRETEiJ_G0033542	Sltm	98	89.577	ENSOGAG00000011297	SLTM	59	90.569	Otolemur_garnettii
MGP_SPRETEiJ_G0033542	Sltm	100	87.911	ENSOARG00000020844	SLTM	60	89.268	Ovis_aries
MGP_SPRETEiJ_G0033542	Sltm	98	89.086	ENSPPAG00000029308	SLTM	61	89.474	Pan_paniscus
MGP_SPRETEiJ_G0033542	Sltm	98	90.069	ENSPPRG00000012400	SLTM	61	92.105	Panthera_pardus
MGP_SPRETEiJ_G0033542	Sltm	95	90.102	ENSPTIG00000021933	SLTM	56	91.334	Panthera_tigris_altaica
MGP_SPRETEiJ_G0033542	Sltm	98	90.954	ENSPTRG00000007121	SLTM	59	91.545	Pan_troglodytes
MGP_SPRETEiJ_G0033542	Sltm	98	88.616	ENSPANG00000017193	SLTM	61	89.474	Papio_anubis
MGP_SPRETEiJ_G0033542	Sltm	84	92.045	ENSPSIG00000005489	SLTM	60	76.414	Pelodiscus_sinensis
MGP_SPRETEiJ_G0033542	Sltm	98	81.018	ENSPCIG00000028356	SLTM	98	80.192	Phascolarctos_cinereus
MGP_SPRETEiJ_G0033542	Sltm	99	45.158	ENSPFOG00000004372	sltm	91	45.197	Poecilia_formosa
MGP_SPRETEiJ_G0033542	Sltm	82	44.577	ENSPLAG00000008000	sltm	91	45.316	Poecilia_latipinna
MGP_SPRETEiJ_G0033542	Sltm	82	44.360	ENSPMEG00000006047	sltm	90	45.098	Poecilia_mexicana
MGP_SPRETEiJ_G0033542	Sltm	82	45.928	ENSPREG00000023236	sltm	91	45.752	Poecilia_reticulata
MGP_SPRETEiJ_G0033542	Sltm	98	89.381	ENSPPYG00000006515	SLTM	59	88.943	Pongo_abelii
MGP_SPRETEiJ_G0033542	Sltm	100	76.425	ENSPCAG00000013482	SLTM	90	78.914	Procavia_capensis
MGP_SPRETEiJ_G0033542	Sltm	98	89.676	ENSPCOG00000010624	SLTM	61	92.105	Propithecus_coquereli
MGP_SPRETEiJ_G0033542	Sltm	98	87.021	ENSPVAG00000015056	SLTM	60	86.667	Pteropus_vampyrus
MGP_SPRETEiJ_G0033542	Sltm	83	49.156	ENSPNYG00000013893	sltm	91	49.315	Pundamilia_nyererei
MGP_SPRETEiJ_G0033542	Sltm	78	56.325	ENSPNAG00000020563	sltm	58	47.261	Pygocentrus_nattereri
MGP_SPRETEiJ_G0033542	Sltm	99	96.023	ENSRNOG00000054446	Sltm	99	96.023	Rattus_norvegicus
MGP_SPRETEiJ_G0033542	Sltm	95	90.816	ENSRBIG00000029226	SLTM	59	91.508	Rhinopithecus_bieti
MGP_SPRETEiJ_G0033542	Sltm	98	90.757	ENSRROG00000045301	SLTM	60	91.382	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033542	Sltm	98	90.364	ENSSBOG00000018883	SLTM	61	89.474	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0033542	Sltm	95	79.858	ENSSHAG00000015395	SLTM	58	78.141	Sarcophilus_harrisii
MGP_SPRETEiJ_G0033542	Sltm	99	48.231	ENSSMAG00000000355	sltm	60	41.745	Scophthalmus_maximus
MGP_SPRETEiJ_G0033542	Sltm	83	50.104	ENSSDUG00000018134	sltm	60	43.125	Seriola_dumerili
MGP_SPRETEiJ_G0033542	Sltm	83	50.104	ENSSLDG00000013907	sltm	60	42.812	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033542	Sltm	98	87.807	ENSSSCG00000004592	SLTM	95	90.894	Sus_scrofa
MGP_SPRETEiJ_G0033542	Sltm	92	74.423	ENSTGUG00000006017	SLTM	57	72.545	Taeniopygia_guttata
MGP_SPRETEiJ_G0033542	Sltm	95	84.082	ENSTBEG00000000945	SLTM	59	81.976	Tupaia_belangeri
MGP_SPRETEiJ_G0033542	Sltm	100	89.555	ENSTTRG00000005246	SLTM	59	91.057	Tursiops_truncatus
MGP_SPRETEiJ_G0033542	Sltm	78	89.826	ENSUAMG00000025901	SLTM	50	91.563	Ursus_americanus
MGP_SPRETEiJ_G0033542	Sltm	96	87.827	ENSUMAG00000023678	SLTM	97	88.848	Ursus_maritimus
MGP_SPRETEiJ_G0033542	Sltm	95	88.787	ENSVPAG00000008606	SLTM	59	90.468	Vicugna_pacos
MGP_SPRETEiJ_G0033542	Sltm	98	88.998	ENSVVUG00000001450	SLTM	65	93.548	Vulpes_vulpes
MGP_SPRETEiJ_G0033542	Sltm	82	45.119	ENSXMAG00000014466	sltm	91	45.425	Xiphophorus_maculatus