EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033607 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 32863 bases
Position: chr9:78341375-78374237
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0092451	KH_1	PF00013.29	4.5e-12	1	1
MGP_SPRETEiJ_P0092451	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0092451	-	2207	-	MGP_SPRETEiJ_P0092451	646 (aa)	-	UPI00000257D8

Gene Model

Click here to download MGP_SPRETEiJ_G0033607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0033607	Ddx43	74	36.066	MGP_SPRETEiJ_G0018158	Ddx42	50	36.066
MGP_SPRETEiJ_G0033607	Ddx43	64	36.941	MGP_SPRETEiJ_G0019448	Ddx41	65	37.232
MGP_SPRETEiJ_G0033607	Ddx43	55	34.974	MGP_SPRETEiJ_G0015336	Ddx18	56	34.974
MGP_SPRETEiJ_G0033607	Ddx43	53	31.768	MGP_SPRETEiJ_G0028753	Ddx55	59	31.768
MGP_SPRETEiJ_G0033607	Ddx43	68	43.527	MGP_SPRETEiJ_G0020915	Ddx17	67	43.527
MGP_SPRETEiJ_G0033607	Ddx43	62	33.580	MGP_SPRETEiJ_G0015463	Ddx59	61	34.278
MGP_SPRETEiJ_G0033607	Ddx43	63	40.757	MGP_SPRETEiJ_G0021137	Ddx23	54	40.757
MGP_SPRETEiJ_G0033607	Ddx43	56	32.240	MGP_SPRETEiJ_G0021508	Eif4a2	91	31.398
MGP_SPRETEiJ_G0033607	Ddx43	60	34.663	MGP_SPRETEiJ_G0032257	Ddx49	81	34.663
MGP_SPRETEiJ_G0033607	Ddx43	54	30.159	MGP_SPRETEiJ_G0032628	Ddx28	70	30.423
MGP_SPRETEiJ_G0033607	Ddx43	68	44.519	MGP_SPRETEiJ_G0018173	Ddx5	71	44.519
MGP_SPRETEiJ_G0033607	Ddx43	59	35.678	MGP_SPRETEiJ_G0030034	Ddx47	91	34.218
MGP_SPRETEiJ_G0033607	Ddx43	63	34.375	MGP_SPRETEiJ_G0017733	Ddx52	69	34.375
MGP_SPRETEiJ_G0033607	Ddx43	60	39.012	MGP_SPRETEiJ_G0015828	D1Pas1	61	39.012
MGP_SPRETEiJ_G0033607	Ddx43	54	31.831	MGP_SPRETEiJ_G0018339	Eif4a3	84	31.831
MGP_SPRETEiJ_G0033607	Ddx43	60	40.000	MGP_SPRETEiJ_G0019772	Ddx4	56	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033607	Ddx43	100	81.538	ENSAMEG00000007851	-	100	81.692	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033607	Ddx43	100	76.507	ENSBTAG00000021814	-	99	76.507	Bos_taurus
MGP_SPRETEiJ_G0033607	Ddx43	100	80.650	ENSCAFG00020010029	-	100	80.650	Canis_lupus_dingo
MGP_SPRETEiJ_G0033607	Ddx43	99	75.466	ENSCAFG00020002717	-	99	75.466	Canis_lupus_dingo
MGP_SPRETEiJ_G0033607	Ddx43	100	76.662	ENSCHIG00000017351	-	99	76.662	Capra_hircus
MGP_SPRETEiJ_G0033607	Ddx43	78	81.873	ENSCAPG00000004247	-	100	81.873	Cavia_aperea
MGP_SPRETEiJ_G0033607	Ddx43	100	86.244	ENSCPOG00000003991	-	100	86.399	Cavia_porcellus
MGP_SPRETEiJ_G0033607	Ddx43	100	78.241	ENSCLAG00000010261	-	100	78.549	Chinchilla_lanigera
MGP_SPRETEiJ_G0033607	Ddx43	61	79.586	ENSCHOG00000003450	-	69	79.586	Choloepus_hoffmanni
MGP_SPRETEiJ_G0033607	Ddx43	100	95.356	ENSCGRG00001001145	Ddx43	100	95.356	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033607	Ddx43	87	96.625	ENSCGRG00000010217	Ddx43	100	96.625	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0033607	Ddx43	100	82.462	ENSDNOG00000017589	-	99	82.462	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033607	Ddx43	100	86.708	ENSDORG00000030010	Ddx43	100	87.481	Dipodomys_ordii
MGP_SPRETEiJ_G0033607	Ddx43	80	90.265	ENSETEG00000001887	-	81	90.265	Echinops_telfairi
MGP_SPRETEiJ_G0033607	Ddx43	100	82.535	ENSEASG00005004346	-	89	82.535	Equus_asinus_asinus
MGP_SPRETEiJ_G0033607	Ddx43	100	82.380	ENSECAG00000017971	DDX43	98	82.380	Equus_caballus
MGP_SPRETEiJ_G0033607	Ddx43	100	79.598	ENSFCAG00000031631	-	99	79.598	Felis_catus
MGP_SPRETEiJ_G0033607	Ddx43	87	87.389	ENSHGLG00000001118	-	100	87.389	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033607	Ddx43	92	85.714	ENSHGLG00100011895	-	99	82.732	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033607	Ddx43	87	80.817	ENSSTOG00000032538	-	100	80.817	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033607	Ddx43	100	88.408	ENSJJAG00000014184	Ddx43	100	89.490	Jaculus_jaculus
MGP_SPRETEiJ_G0033607	Ddx43	93	85.124	ENSLAFG00000012755	-	100	85.124	Loxodonta_africana
MGP_SPRETEiJ_G0033607	Ddx43	100	93.808	ENSMAUG00000001441	Ddx43	100	93.498	Mesocricetus_auratus
MGP_SPRETEiJ_G0033607	Ddx43	100	94.453	ENSMOCG00000012956	Ddx43	100	94.299	Microtus_ochrogaster
MGP_SPRETEiJ_G0033607	Ddx43	100	99.381	MGP_CAROLIEiJ_G0032467	Ddx43	100	99.381	Mus_caroli
MGP_SPRETEiJ_G0033607	Ddx43	100	100.000	ENSMUSG00000070291	Ddx43	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0033607	Ddx43	100	83.462	MGP_PahariEiJ_G0015333	Ddx43	100	83.462	Mus_pahari
MGP_SPRETEiJ_G0033607	Ddx43	100	81.607	ENSMPUG00000004342	-	99	81.607	Mustela_putorius_furo
MGP_SPRETEiJ_G0033607	Ddx43	100	82.796	ENSMLUG00000017604	-	100	82.949	Myotis_lucifugus
MGP_SPRETEiJ_G0033607	Ddx43	100	93.189	ENSNGAG00000015102	Ddx43	100	93.189	Nannospalax_galili
MGP_SPRETEiJ_G0033607	Ddx43	75	90.179	ENSOPRG00000013523	-	86	90.179	Ochotona_princeps
MGP_SPRETEiJ_G0033607	Ddx43	84	85.478	ENSODEG00000016207	-	99	85.478	Octodon_degus
MGP_SPRETEiJ_G0033607	Ddx43	98	65.827	ENSOCUG00000025811	-	98	65.827	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033607	Ddx43	100	77.743	ENSOCUG00000006338	-	100	78.362	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033607	Ddx43	100	76.198	ENSOARG00000010873	-	99	76.198	Ovis_aries
MGP_SPRETEiJ_G0033607	Ddx43	100	79.907	ENSPTIG00000017842	-	99	79.907	Panthera_tigris_altaica
MGP_SPRETEiJ_G0033607	Ddx43	87	97.869	ENSPEMG00000023986	Ddx43	100	97.869	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033607	Ddx43	99	81.085	ENSPCAG00000005962	-	99	81.705	Procavia_capensis
MGP_SPRETEiJ_G0033607	Ddx43	87	88.475	ENSPVAG00000012718	-	99	88.475	Pteropus_vampyrus
MGP_SPRETEiJ_G0033607	Ddx43	100	98.452	ENSRNOG00000050868	Ddx43	100	98.452	Rattus_norvegicus
MGP_SPRETEiJ_G0033607	Ddx43	84	86.289	ENSSARG00000013493	-	99	86.289	Sorex_araneus
MGP_SPRETEiJ_G0033607	Ddx43	100	77.589	ENSSSCG00000004287	-	99	78.207	Sus_scrofa
MGP_SPRETEiJ_G0033607	Ddx43	87	73.712	ENSTTRG00000001488	-	99	73.712	Tursiops_truncatus
MGP_SPRETEiJ_G0033607	Ddx43	83	77.757	ENSUAMG00000012894	-	83	77.941	Ursus_americanus
MGP_SPRETEiJ_G0033607	Ddx43	100	81.327	ENSUMAG00000012291	-	99	81.481	Ursus_maritimus
MGP_SPRETEiJ_G0033607	Ddx43	94	72.459	ENSVPAG00000004969	-	100	72.951	Vicugna_pacos
MGP_SPRETEiJ_G0033607	Ddx43	100	80.341	ENSVVUG00000013908	-	100	80.341	Vulpes_vulpes