EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033708 (Gene tree)
Gene ID: -
Gene Symbol: Dbr1
Alias: -
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 8752 bases
Position: chr9:100072195-100080946
Accession: 1931520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0092945	DBR1	PF05011.13	2.9e-34	1	1
MGP_SPRETEiJ_P0092950	DBR1	PF05011.13	4.6e-20	1	1
MGP_SPRETEiJ_P0092946	DBR1	PF05011.13	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0092947	-	485	-	MGP_SPRETEiJ_P0092947	147 (aa)	-	-
MGP_SPRETEiJ_T0092946	-	796	-	MGP_SPRETEiJ_P0092946	231 (aa)	-	UPI000198D07D
MGP_SPRETEiJ_T0092945	-	2253	-	MGP_SPRETEiJ_P0092945	547 (aa)	-	-
MGP_SPRETEiJ_T0092949	-	833	-	MGP_SPRETEiJ_P0092949	83 (aa)	-	UPI000198D080
MGP_SPRETEiJ_T0092948	-	491	-	MGP_SPRETEiJ_P0092948	163 (aa)	-	-
MGP_SPRETEiJ_T0092950	-	521	-	MGP_SPRETEiJ_P0092950	150 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSG00000138231	DBR1	94	95.495	Homo_sapiens
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSAPOG00000004318	dbr1	99	58.258	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0033708	Dbr1	99	96.875	ENSAMEG00000006272	DBR1	100	85.609	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033708	Dbr1	95	68.354	ENSACIG00000020512	dbr1	99	54.355	Amphilophus_citrinellus
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSAOCG00000008060	dbr1	99	58.076	Amphiprion_ocellaris
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSAPEG00000021944	dbr1	99	58.439	Amphiprion_percula
MGP_SPRETEiJ_G0033708	Dbr1	95	67.089	ENSATEG00000019673	dbr1	99	57.500	Anabas_testudineus
MGP_SPRETEiJ_G0033708	Dbr1	87	81.944	ENSACAG00000016760	DBR1	99	64.599	Anolis_carolinensis
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSANAG00000028952	DBR1	100	97.576	Aotus_nancymaae
MGP_SPRETEiJ_G0033708	Dbr1	95	70.886	ENSACLG00000024027	dbr1	99	55.872	Astatotilapia_calliptera
MGP_SPRETEiJ_G0033708	Dbr1	93	71.429	ENSAMXG00000030736	dbr1	99	56.140	Astyanax_mexicanus
MGP_SPRETEiJ_G0033708	Dbr1	100	96.319	ENSBTAG00000019949	DBR1	99	85.028	Bos_taurus
MGP_SPRETEiJ_G0033708	Dbr1	93	57.669	WBGene00000937	dbr-1	80	43.842	Caenorhabditis_elegans
MGP_SPRETEiJ_G0033708	Dbr1	100	97.546	ENSCJAG00000002433	DBR1	99	84.871	Callithrix_jacchus
MGP_SPRETEiJ_G0033708	Dbr1	98	90.123	ENSCAFG00000007501	DBR1	100	85.138	Canis_familiaris
MGP_SPRETEiJ_G0033708	Dbr1	98	90.123	ENSCAFG00020008060	DBR1	100	85.138	Canis_lupus_dingo
MGP_SPRETEiJ_G0033708	Dbr1	100	95.706	ENSCHIG00000026937	DBR1	99	84.843	Capra_hircus
MGP_SPRETEiJ_G0033708	Dbr1	100	93.865	ENSTSYG00000005317	DBR1	99	81.569	Carlito_syrichta
MGP_SPRETEiJ_G0033708	Dbr1	100	86.503	ENSCPOG00000006179	DBR1	99	81.319	Cavia_porcellus
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSCCAG00000025708	DBR1	100	85.138	Cebus_capucinus
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSCATG00000032054	DBR1	100	86.996	Cercocebus_atys
MGP_SPRETEiJ_G0033708	Dbr1	98	85.185	ENSCLAG00000001800	DBR1	99	83.700	Chinchilla_lanigera
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSCSAG00000010977	DBR1	100	86.264	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033708	Dbr1	98	87.654	ENSCHOG00000000730	DBR1	89	94.118	Choloepus_hoffmanni
MGP_SPRETEiJ_G0033708	Dbr1	100	88.957	ENSCPBG00000007633	DBR1	90	70.772	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033708	Dbr1	98	57.317	ENSCING00000011388	-	98	52.765	Ciona_intestinalis
MGP_SPRETEiJ_G0033708	Dbr1	96	60.000	ENSCSAVG00000007545	-	100	56.992	Ciona_savignyi
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSCANG00000024237	DBR1	99	86.900	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0033708	Dbr1	100	99.387	ENSCGRG00001018497	Dbr1	99	91.912	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033708	Dbr1	98	92.593	ENSCGRG00000005958	Dbr1	99	86.029	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0033708	Dbr1	98	77.301	ENSCSEG00000002813	dbr1	99	54.174	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033708	Dbr1	95	65.823	ENSCVAG00000019969	dbr1	100	56.714	Cyprinodon_variegatus
MGP_SPRETEiJ_G0033708	Dbr1	98	75.309	ENSDARG00000056923	dbr1	99	56.261	Danio_rerio
MGP_SPRETEiJ_G0033708	Dbr1	100	96.319	ENSDNOG00000043630	DBR1	100	83.150	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033708	Dbr1	97	67.066	FBgn0035838	ldbr	78	51.313	Drosophila_melanogaster
MGP_SPRETEiJ_G0033708	Dbr1	87	97.761	ENSETEG00000011830	DBR1	81	97.761	Echinops_telfairi
MGP_SPRETEiJ_G0033708	Dbr1	93	62.338	ENSEBUG00000007494	dbr1	99	47.049	Eptatretus_burgeri
MGP_SPRETEiJ_G0033708	Dbr1	100	95.092	ENSEASG00005003788	DBR1	100	86.239	Equus_asinus_asinus
MGP_SPRETEiJ_G0033708	Dbr1	100	95.706	ENSECAG00000013920	DBR1	100	86.422	Equus_caballus
MGP_SPRETEiJ_G0033708	Dbr1	98	87.654	ENSEEUG00000007059	DBR1	100	75.275	Erinaceus_europaeus
MGP_SPRETEiJ_G0033708	Dbr1	94	71.795	ENSELUG00000005587	dbr1	99	55.376	Esox_lucius
MGP_SPRETEiJ_G0033708	Dbr1	100	96.933	ENSFCAG00000002229	DBR1	100	86.239	Felis_catus
MGP_SPRETEiJ_G0033708	Dbr1	98	80.247	ENSFALG00000013467	DBR1	85	69.174	Ficedula_albicollis
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSFDAG00000009524	DBR1	100	83.883	Fukomys_damarensis
MGP_SPRETEiJ_G0033708	Dbr1	98	70.370	ENSFHEG00000001743	dbr1	99	55.277	Fundulus_heteroclitus
MGP_SPRETEiJ_G0033708	Dbr1	95	69.620	ENSGMOG00000006925	dbr1	99	53.357	Gadus_morhua
MGP_SPRETEiJ_G0033708	Dbr1	98	80.247	ENSGALG00000043797	DBR1	99	60.917	Gallus_gallus
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSGAFG00000001046	dbr1	99	56.490	Gambusia_affinis
MGP_SPRETEiJ_G0033708	Dbr1	98	67.073	ENSGACG00000009122	dbr1	99	55.098	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033708	Dbr1	100	88.344	ENSGAGG00000001244	DBR1	100	70.221	Gopherus_agassizii
MGP_SPRETEiJ_G0033708	Dbr1	98	88.889	ENSGGOG00000004564	DBR1	99	81.502	Gorilla_gorilla
MGP_SPRETEiJ_G0033708	Dbr1	95	70.886	ENSHBUG00000000882	dbr1	99	55.872	Haplochromis_burtoni
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSHGLG00000014529	Dbr1	100	84.066	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSHGLG00100013202	Dbr1	100	84.066	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033708	Dbr1	95	68.354	ENSHCOG00000004179	dbr1	99	55.735	Hippocampus_comes
MGP_SPRETEiJ_G0033708	Dbr1	95	73.418	ENSIPUG00000023749	dbr1	99	55.052	Ictalurus_punctatus
MGP_SPRETEiJ_G0033708	Dbr1	100	97.546	ENSSTOG00000007122	DBR1	100	84.799	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033708	Dbr1	100	99.387	ENSJJAG00000017080	Dbr1	99	85.478	Jaculus_jaculus
MGP_SPRETEiJ_G0033708	Dbr1	98	64.198	ENSKMAG00000004869	dbr1	100	54.594	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0033708	Dbr1	98	81.595	ENSLBEG00000021307	dbr1	99	55.477	Labrus_bergylta
MGP_SPRETEiJ_G0033708	Dbr1	98	80.488	ENSLACG00000005547	DBR1	99	66.241	Latimeria_chalumnae
MGP_SPRETEiJ_G0033708	Dbr1	95	68.354	ENSLOCG00000004160	dbr1	99	57.500	Lepisosteus_oculatus
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSLAFG00000005827	DBR1	100	84.954	Loxodonta_africana
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSMFAG00000043642	DBR1	100	86.813	Macaca_fascicularis
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSMMUG00000021284	DBR1	100	86.630	Macaca_mulatta
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSMNEG00000041740	DBR1	100	86.813	Macaca_nemestrina
MGP_SPRETEiJ_G0033708	Dbr1	91	70.341	ENSMLEG00000034542	DBR1	95	72.541	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0033708	Dbr1	95	67.089	ENSMAMG00000012205	dbr1	100	55.633	Mastacembelus_armatus
MGP_SPRETEiJ_G0033708	Dbr1	95	70.886	ENSMZEG00005021338	dbr1	99	55.872	Maylandia_zebra
MGP_SPRETEiJ_G0033708	Dbr1	98	80.247	ENSMGAG00000002142	DBR1	99	65.367	Meleagris_gallopavo
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSMAUG00000010037	Dbr1	99	92.435	Mesocricetus_auratus
MGP_SPRETEiJ_G0033708	Dbr1	100	99.387	ENSMICG00000049533	DBR1	99	86.081	Microcebus_murinus
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSMOCG00000018746	Dbr1	99	90.018	Microtus_ochrogaster
MGP_SPRETEiJ_G0033708	Dbr1	94	69.231	ENSMMOG00000000719	dbr1	99	56.071	Mola_mola
MGP_SPRETEiJ_G0033708	Dbr1	100	91.411	ENSMODG00000018554	DBR1	99	73.810	Monodelphis_domestica
MGP_SPRETEiJ_G0033708	Dbr1	95	69.620	ENSMALG00000022283	dbr1	97	56.106	Monopterus_albus
MGP_SPRETEiJ_G0033708	Dbr1	100	100.000	MGP_CAROLIEiJ_G0032564	Dbr1	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0033708	Dbr1	100	100.000	ENSMUSG00000032469	Dbr1	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0033708	Dbr1	100	100.000	MGP_PahariEiJ_G0015433	Dbr1	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0033708	Dbr1	100	96.319	ENSMPUG00000009230	DBR1	100	86.239	Mustela_putorius_furo
MGP_SPRETEiJ_G0033708	Dbr1	100	97.546	ENSMLUG00000026117	DBR1	100	84.095	Myotis_lucifugus
MGP_SPRETEiJ_G0033708	Dbr1	98	91.358	ENSNGAG00000003518	Dbr1	99	87.546	Nannospalax_galili
MGP_SPRETEiJ_G0033708	Dbr1	95	70.886	ENSNBRG00000016318	dbr1	99	55.437	Neolamprologus_brichardi
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSNLEG00000032263	DBR1	97	86.716	Nomascus_leucogenys
MGP_SPRETEiJ_G0033708	Dbr1	100	90.798	ENSMEUG00000009188	DBR1	99	73.761	Notamacropus_eugenii
MGP_SPRETEiJ_G0033708	Dbr1	84	94.488	ENSOPRG00000016510	DBR1	100	72.781	Ochotona_princeps
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSODEG00000018178	DBR1	99	82.657	Octodon_degus
MGP_SPRETEiJ_G0033708	Dbr1	95	70.886	ENSONIG00000013801	dbr1	99	55.240	Oreochromis_niloticus
MGP_SPRETEiJ_G0033708	Dbr1	98	83.951	ENSOANG00000007783	DBR1	100	70.183	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0033708	Dbr1	98	91.358	ENSOCUG00000015129	DBR1	90	85.907	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033708	Dbr1	98	71.605	ENSORLG00015001112	dbr1	99	56.194	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0033708	Dbr1	95	67.089	ENSOMEG00000000857	dbr1	99	55.755	Oryzias_melastigma
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSOGAG00000033095	DBR1	99	87.638	Otolemur_garnettii
MGP_SPRETEiJ_G0033708	Dbr1	100	92.025	ENSOARG00000007589	DBR1	99	83.734	Ovis_aries
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSPPAG00000031137	DBR1	99	86.447	Pan_paniscus
MGP_SPRETEiJ_G0033708	Dbr1	100	96.933	ENSPPRG00000013629	DBR1	100	86.239	Panthera_pardus
MGP_SPRETEiJ_G0033708	Dbr1	95	96.026	ENSPTIG00000012674	DBR1	98	85.741	Panthera_tigris_altaica
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSPTRG00000015441	DBR1	99	86.264	Pan_troglodytes
MGP_SPRETEiJ_G0033708	Dbr1	100	98.773	ENSPANG00000012664	DBR1	100	86.630	Papio_anubis
MGP_SPRETEiJ_G0033708	Dbr1	95	74.684	ENSPKIG00000000310	dbr1	99	56.667	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033708	Dbr1	98	83.951	ENSPSIG00000015486	DBR1	99	69.937	Pelodiscus_sinensis
MGP_SPRETEiJ_G0033708	Dbr1	100	96.933	ENSPEMG00000020602	Dbr1	98	90.590	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033708	Dbr1	96	63.750	ENSPMAG00000008620	dbr1	100	60.526	Petromyzon_marinus
MGP_SPRETEiJ_G0033708	Dbr1	100	90.184	ENSPCIG00000006494	DBR1	99	73.945	Phascolarctos_cinereus
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSPLAG00000002421	-	99	47.644	Poecilia_latipinna
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSPLAG00000011665	dbr1	99	57.299	Poecilia_latipinna
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSPMEG00000020884	-	93	46.392	Poecilia_mexicana
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSPMEG00000010080	dbr1	99	56.466	Poecilia_mexicana
MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	ENSPREG00000020157	dbr1	99	56.364	Poecilia_reticulata
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSPPYG00000014139	DBR1	99	87.269	Pongo_abelii
MGP_SPRETEiJ_G0033708	Dbr1	98	85.185	ENSPCAG00000012956	DBR1	99	88.432	Procavia_capensis
MGP_SPRETEiJ_G0033708	Dbr1	100	99.387	ENSPCOG00000016894	DBR1	99	87.269	Propithecus_coquereli
MGP_SPRETEiJ_G0033708	Dbr1	98	90.123	ENSPVAG00000007713	DBR1	100	76.881	Pteropus_vampyrus
MGP_SPRETEiJ_G0033708	Dbr1	95	70.886	ENSPNYG00000015453	dbr1	99	55.595	Pundamilia_nyererei
MGP_SPRETEiJ_G0033708	Dbr1	94	71.795	ENSPNAG00000025595	dbr1	99	56.719	Pygocentrus_nattereri
MGP_SPRETEiJ_G0033708	Dbr1	100	99.387	ENSRNOG00000014588	Dbr1	100	93.419	Rattus_norvegicus
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSRBIG00000045002	DBR1	99	86.264	Rhinopithecus_bieti
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSRROG00000044819	DBR1	99	86.447	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033708	Dbr1	98	33.884	YKL149C	DBR1	79	40.000	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0033708	Dbr1	100	98.160	ENSSBOG00000032048	DBR1	99	84.799	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0033708	Dbr1	100	92.025	ENSSHAG00000006752	DBR1	99	73.394	Sarcophilus_harrisii
MGP_SPRETEiJ_G0033708	Dbr1	95	73.418	ENSSFOG00015011410	dbr1	100	57.220	Scleropages_formosus
MGP_SPRETEiJ_G0033708	Dbr1	94	70.513	ENSSMAG00000016078	dbr1	99	55.417	Scophthalmus_maximus
MGP_SPRETEiJ_G0033708	Dbr1	94	69.231	ENSSDUG00000017849	dbr1	99	55.634	Seriola_dumerili
MGP_SPRETEiJ_G0033708	Dbr1	94	69.231	ENSSLDG00000019891	dbr1	99	55.477	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033708	Dbr1	98	87.654	ENSSARG00000009558	-	98	72.794	Sorex_araneus
MGP_SPRETEiJ_G0033708	Dbr1	65	92.593	ENSSARG00000003148	-	74	90.667	Sorex_araneus
MGP_SPRETEiJ_G0033708	Dbr1	98	75.309	ENSSPUG00000004724	DBR1	92	63.655	Sphenodon_punctatus
MGP_SPRETEiJ_G0033708	Dbr1	98	67.901	ENSSPAG00000016892	dbr1	99	57.895	Stegastes_partitus
MGP_SPRETEiJ_G0033708	Dbr1	100	97.546	ENSSSCG00000031098	DBR1	99	85.240	Sus_scrofa
MGP_SPRETEiJ_G0033708	Dbr1	98	80.247	ENSTGUG00000007073	DBR1	96	68.824	Taeniopygia_guttata
MGP_SPRETEiJ_G0033708	Dbr1	95	67.089	ENSTRUG00000021594	dbr1	99	52.456	Takifugu_rubripes
MGP_SPRETEiJ_G0033708	Dbr1	95	69.620	ENSTNIG00000006710	dbr1	99	53.943	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0033708	Dbr1	100	97.546	ENSTTRG00000004020	DBR1	99	85.424	Tursiops_truncatus
MGP_SPRETEiJ_G0033708	Dbr1	100	96.933	ENSUAMG00000004639	DBR1	100	85.505	Ursus_americanus
MGP_SPRETEiJ_G0033708	Dbr1	100	96.933	ENSUMAG00000015012	DBR1	100	85.688	Ursus_maritimus
MGP_SPRETEiJ_G0033708	Dbr1	98	90.123	ENSVPAG00000011711	DBR1	99	79.520	Vicugna_pacos
MGP_SPRETEiJ_G0033708	Dbr1	98	88.889	ENSVVUG00000026604	DBR1	100	84.954	Vulpes_vulpes
MGP_SPRETEiJ_G0033708	Dbr1	98	79.012	ENSXETG00000027491	dbr1	99	64.273	Xenopus_tropicalis
MGP_SPRETEiJ_G0033708	Dbr1	98	67.901	ENSXCOG00000018078	dbr1	99	56.987	Xiphophorus_couchianus
MGP_SPRETEiJ_G0033708	Dbr1	98	67.901	ENSXMAG00000007311	dbr1	99	57.091	Xiphophorus_maculatus