EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033763 (Gene tree)
Gene ID: -
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 72778 bases
Position: chr9:107076278-107149055
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0093232	eIF2A	PF08662.11	2.4e-10	1	1
MGP_SPRETEiJ_P0093231	eIF2A	PF08662.11	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0093232	-	1243	-	MGP_SPRETEiJ_P0093232	356 (aa)	-	-
MGP_SPRETEiJ_T0093233	-	1218	-	MGP_SPRETEiJ_P0093233	405 (aa)	-	-
MGP_SPRETEiJ_T0093231	-	1697	-	MGP_SPRETEiJ_P0093231	405 (aa)	-	-
MGP_SPRETEiJ_T0093236	-	519	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0093234	-	1413	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0093235	-	727	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033763's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0033763	Poc1a	80	30.037	MGP_SPRETEiJ_G0023618	Prpf19	55	30.037
MGP_SPRETEiJ_G0033763	Poc1a	83	34.630	MGP_SPRETEiJ_G0024260	Wdr5	98	30.973
MGP_SPRETEiJ_G0033763	Poc1a	81	32.353	MGP_SPRETEiJ_G0033373	Wdr61	97	31.658
MGP_SPRETEiJ_G0033763	Poc1a	83	33.333	MGP_SPRETEiJ_G0021608	Wdr5b	93	33.333
MGP_SPRETEiJ_G0033763	Poc1a	82	30.000	MGP_SPRETEiJ_G0027042	Prpf4	56	30.000
MGP_SPRETEiJ_G0033763	Poc1a	80	35.354	MGP_SPRETEiJ_G0025171	Ciao1	85	35.354
MGP_SPRETEiJ_G0033763	Poc1a	93	32.716	MGP_SPRETEiJ_G0026371	Wdr3	61	31.447
MGP_SPRETEiJ_G0033763	Poc1a	82	32.636	MGP_SPRETEiJ_G0019700	Utp15	52	32.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033763	Poc1a	100	91.643	ENSG00000164087	POC1A	100	91.643	Homo_sapiens
MGP_SPRETEiJ_G0033763	Poc1a	96	80.147	ENSAPOG00000002677	POC1A	98	80.147	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0033763	Poc1a	100	90.418	ENSAMEG00000009136	POC1A	99	90.418	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033763	Poc1a	94	84.615	ENSACIG00000018288	poc1a	76	84.615	Amphilophus_citrinellus
MGP_SPRETEiJ_G0033763	Poc1a	98	78.777	ENSAOCG00000001066	POC1A	97	78.808	Amphiprion_ocellaris
MGP_SPRETEiJ_G0033763	Poc1a	97	79.139	ENSAPEG00000005795	poc1a	96	75.872	Amphiprion_percula
MGP_SPRETEiJ_G0033763	Poc1a	98	77.307	ENSAPLG00000007756	POC1A	99	77.307	Anas_platyrhynchos
MGP_SPRETEiJ_G0033763	Poc1a	100	89.435	ENSANAG00000030897	POC1A	100	89.435	Aotus_nancymaae
MGP_SPRETEiJ_G0033763	Poc1a	99	77.597	ENSACLG00000017869	POC1A	98	78.808	Astatotilapia_calliptera
MGP_SPRETEiJ_G0033763	Poc1a	96	71.930	ENSAMXG00000024703	poc1a	97	71.930	Astyanax_mexicanus
MGP_SPRETEiJ_G0033763	Poc1a	98	90.080	ENSBTAG00000001471	POC1A	100	89.973	Bos_taurus
MGP_SPRETEiJ_G0033763	Poc1a	100	90.808	ENSCJAG00000005972	POC1A	100	90.808	Callithrix_jacchus
MGP_SPRETEiJ_G0033763	Poc1a	100	83.990	ENSCAFG00020022379	POC1A	100	83.990	Canis_lupus_dingo
MGP_SPRETEiJ_G0033763	Poc1a	100	89.681	ENSCHIG00000002571	POC1A	100	89.681	Capra_hircus
MGP_SPRETEiJ_G0033763	Poc1a	100	92.479	ENSTSYG00000008302	POC1A	100	92.479	Carlito_syrichta
MGP_SPRETEiJ_G0033763	Poc1a	83	93.704	ENSCAPG00000016201	POC1A	89	80.163	Cavia_aperea
MGP_SPRETEiJ_G0033763	Poc1a	100	89.944	ENSCPOG00000006740	POC1A	100	89.944	Cavia_porcellus
MGP_SPRETEiJ_G0033763	Poc1a	100	89.926	ENSCCAG00000023380	POC1A	100	89.926	Cebus_capucinus
MGP_SPRETEiJ_G0033763	Poc1a	100	88.943	ENSCATG00000021822	POC1A	100	88.943	Cercocebus_atys
MGP_SPRETEiJ_G0033763	Poc1a	99	85.352	ENSCLAG00000010593	POC1A	99	85.352	Chinchilla_lanigera
MGP_SPRETEiJ_G0033763	Poc1a	98	89.431	ENSCSAG00000013862	POC1A	100	89.431	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033763	Poc1a	80	87.085	ENSCPBG00000016728	POC1A	98	87.085	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0033763	Poc1a	97	66.565	ENSCSAVG00000008477	-	99	66.565	Ciona_savignyi
MGP_SPRETEiJ_G0033763	Poc1a	99	91.573	ENSCANG00000033064	POC1A	99	91.573	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0033763	Poc1a	99	92.958	ENSCGRG00001007357	Poc1a	99	92.958	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033763	Poc1a	96	68.205	ENSCSEG00000010287	POC1A	94	74.503	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033763	Poc1a	97	66.830	ENSCVAG00000015594	POC1A	97	77.703	Cyprinodon_variegatus
MGP_SPRETEiJ_G0033763	Poc1a	76	60.000	ENSEBUG00000008246	POC1A	55	59.184	Eptatretus_burgeri
MGP_SPRETEiJ_G0033763	Poc1a	83	59.797	ENSEBUG00000008013	poc1a	85	59.797	Eptatretus_burgeri
MGP_SPRETEiJ_G0033763	Poc1a	87	66.987	ENSEBUG00000002614	POC1A	94	66.667	Eptatretus_burgeri
MGP_SPRETEiJ_G0033763	Poc1a	97	67.929	ENSELUG00000015504	poc1a	97	68.238	Esox_lucius
MGP_SPRETEiJ_G0033763	Poc1a	100	92.201	ENSFCAG00000015704	POC1A	100	92.201	Felis_catus
MGP_SPRETEiJ_G0033763	Poc1a	99	74.138	ENSFALG00000008922	POC1A	99	74.138	Ficedula_albicollis
MGP_SPRETEiJ_G0033763	Poc1a	100	89.665	ENSFDAG00000011606	POC1A	100	89.665	Fukomys_damarensis
MGP_SPRETEiJ_G0033763	Poc1a	98	68.579	ENSFHEG00000015504	POC1A	98	72.446	Fundulus_heteroclitus
MGP_SPRETEiJ_G0033763	Poc1a	99	78.470	ENSGALG00000034572	-	98	78.470	Gallus_gallus
MGP_SPRETEiJ_G0033763	Poc1a	98	68.657	ENSGACG00000007015	poc1a	97	68.657	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0033763	Poc1a	99	76.980	ENSGAGG00000014637	POC1A	99	76.980	Gopherus_agassizii
MGP_SPRETEiJ_G0033763	Poc1a	100	91.643	ENSGGOG00000006652	POC1A	100	91.643	Gorilla_gorilla
MGP_SPRETEiJ_G0033763	Poc1a	100	90.503	ENSHGLG00000013436	POC1A	100	90.503	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033763	Poc1a	100	89.189	ENSHGLG00100003479	POC1A	100	89.189	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0033763	Poc1a	97	67.939	ENSIPUG00000001227	POC1A	95	67.939	Ictalurus_punctatus
MGP_SPRETEiJ_G0033763	Poc1a	100	91.620	ENSSTOG00000002638	POC1A	100	91.620	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033763	Poc1a	100	92.179	ENSJJAG00000018739	Poc1a	100	92.179	Jaculus_jaculus
MGP_SPRETEiJ_G0033763	Poc1a	96	82.143	ENSLBEG00000016119	POC1A	97	72.446	Labrus_bergylta
MGP_SPRETEiJ_G0033763	Poc1a	100	66.743	ENSLACG00000018788	POC1A	98	79.934	Latimeria_chalumnae
MGP_SPRETEiJ_G0033763	Poc1a	97	71.535	ENSLOCG00000013801	poc1a	96	71.535	Lepisosteus_oculatus
MGP_SPRETEiJ_G0033763	Poc1a	99	81.592	ENSLAFG00000028434	POC1A	100	87.043	Loxodonta_africana
MGP_SPRETEiJ_G0033763	Poc1a	98	88.889	ENSMFAG00000001970	POC1A	100	88.889	Macaca_fascicularis
MGP_SPRETEiJ_G0033763	Poc1a	100	88.943	ENSMMUG00000012485	POC1A	100	88.943	Macaca_mulatta
MGP_SPRETEiJ_G0033763	Poc1a	98	88.889	ENSMNEG00000042811	POC1A	100	88.889	Macaca_nemestrina
MGP_SPRETEiJ_G0033763	Poc1a	100	90.529	ENSMLEG00000039574	POC1A	100	90.529	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0033763	Poc1a	96	78.417	ENSMAMG00000014233	POC1A	98	78.417	Mastacembelus_armatus
MGP_SPRETEiJ_G0033763	Poc1a	99	77.597	ENSMZEG00005013503	POC1A	98	78.808	Maylandia_zebra
MGP_SPRETEiJ_G0033763	Poc1a	95	82.581	ENSMGAG00000001628	POC1A	99	67.338	Meleagris_gallopavo
MGP_SPRETEiJ_G0033763	Poc1a	99	94.930	ENSMAUG00000017403	Poc1a	99	94.930	Mesocricetus_auratus
MGP_SPRETEiJ_G0033763	Poc1a	100	92.201	ENSMICG00000002709	POC1A	100	92.201	Microcebus_murinus
MGP_SPRETEiJ_G0033763	Poc1a	91	95.077	ENSMOCG00000003396	Poc1a	100	93.834	Microtus_ochrogaster
MGP_SPRETEiJ_G0033763	Poc1a	98	66.917	ENSMMOG00000010427	poc1a	94	66.917	Mola_mola
MGP_SPRETEiJ_G0033763	Poc1a	87	85.437	ENSMODG00000011717	POC1A	96	77.838	Monodelphis_domestica
MGP_SPRETEiJ_G0033763	Poc1a	98	73.950	ENSMALG00000009054	poc1a	95	73.950	Monopterus_albus
MGP_SPRETEiJ_G0033763	Poc1a	100	99.259	MGP_CAROLIEiJ_G0032617	Poc1a	100	99.259	Mus_caroli
MGP_SPRETEiJ_G0033763	Poc1a	100	99.753	ENSMUSG00000023345	Poc1a	100	99.753	Mus_musculus
MGP_SPRETEiJ_G0033763	Poc1a	100	99.157	MGP_PahariEiJ_G0015485	Poc1a	100	99.157	Mus_pahari
MGP_SPRETEiJ_G0033763	Poc1a	100	90.663	ENSMPUG00000011723	POC1A	100	90.663	Mustela_putorius_furo
MGP_SPRETEiJ_G0033763	Poc1a	99	89.409	ENSMLUG00000015092	POC1A	92	89.409	Myotis_lucifugus
MGP_SPRETEiJ_G0033763	Poc1a	100	92.118	ENSNGAG00000005212	Poc1a	100	92.118	Nannospalax_galili
MGP_SPRETEiJ_G0033763	Poc1a	97	65.937	ENSNBRG00000022135	poc1a	98	78.523	Neolamprologus_brichardi
MGP_SPRETEiJ_G0033763	Poc1a	100	91.086	ENSNLEG00000007084	POC1A	100	91.086	Nomascus_leucogenys
MGP_SPRETEiJ_G0033763	Poc1a	91	96.429	ENSMEUG00000007715	-	79	96.429	Notamacropus_eugenii
MGP_SPRETEiJ_G0033763	Poc1a	98	87.097	ENSOPRG00000008831	POC1A	91	87.097	Ochotona_princeps
MGP_SPRETEiJ_G0033763	Poc1a	99	89.604	ENSODEG00000018290	POC1A	100	89.604	Octodon_degus
MGP_SPRETEiJ_G0033763	Poc1a	99	76.623	ENSONIG00000014378	POC1A	98	77.815	Oreochromis_niloticus
MGP_SPRETEiJ_G0033763	Poc1a	98	88.889	ENSOCUG00000002080	POC1A	100	88.889	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033763	Poc1a	98	82.143	ENSOMEG00000019834	POC1A	76	82.143	Oryzias_melastigma
MGP_SPRETEiJ_G0033763	Poc1a	100	84.390	ENSOGAG00000032245	POC1A	100	84.390	Otolemur_garnettii
MGP_SPRETEiJ_G0033763	Poc1a	100	89.681	ENSOARG00000006352	POC1A	100	89.435	Ovis_aries
MGP_SPRETEiJ_G0033763	Poc1a	100	91.643	ENSPPAG00000043583	POC1A	100	91.643	Pan_paniscus
MGP_SPRETEiJ_G0033763	Poc1a	100	92.201	ENSPPRG00000003365	POC1A	100	92.201	Panthera_pardus
MGP_SPRETEiJ_G0033763	Poc1a	98	91.057	ENSPTIG00000005388	POC1A	100	91.057	Panthera_tigris_altaica
MGP_SPRETEiJ_G0033763	Poc1a	100	91.643	ENSPTRG00000014989	POC1A	100	91.643	Pan_troglodytes
MGP_SPRETEiJ_G0033763	Poc1a	86	85.342	ENSPSIG00000014809	POC1A	87	86.230	Pelodiscus_sinensis
MGP_SPRETEiJ_G0033763	Poc1a	96	69.409	ENSPMGG00000005356	poc1a	95	69.409	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0033763	Poc1a	91	93.538	ENSPEMG00000024131	Poc1a	100	93.538	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033763	Poc1a	96	75.157	ENSPMAG00000000333	poc1a	80	75.389	Petromyzon_marinus
MGP_SPRETEiJ_G0033763	Poc1a	99	77.612	ENSPCIG00000018160	POC1A	99	77.612	Phascolarctos_cinereus
MGP_SPRETEiJ_G0033763	Poc1a	100	90.172	ENSPPYG00000013816	POC1A	100	90.172	Pongo_abelii
MGP_SPRETEiJ_G0033763	Poc1a	100	85.504	ENSPCAG00000002118	POC1A	100	85.504	Procavia_capensis
MGP_SPRETEiJ_G0033763	Poc1a	100	92.758	ENSPCOG00000012625	POC1A	100	92.758	Propithecus_coquereli
MGP_SPRETEiJ_G0033763	Poc1a	100	71.007	ENSPVAG00000012480	POC1A	100	71.007	Pteropus_vampyrus
MGP_SPRETEiJ_G0033763	Poc1a	98	70.677	ENSPNYG00000019517	poc1a	98	78.523	Pundamilia_nyererei
MGP_SPRETEiJ_G0033763	Poc1a	87	79.935	ENSPNAG00000007556	POC1A	97	79.935	Pygocentrus_nattereri
MGP_SPRETEiJ_G0033763	Poc1a	98	92.120	ENSRNOG00000037295	Poc1a	100	92.120	Rattus_norvegicus
MGP_SPRETEiJ_G0033763	Poc1a	100	91.086	ENSRBIG00000031748	POC1A	100	91.086	Rhinopithecus_bieti
MGP_SPRETEiJ_G0033763	Poc1a	100	91.086	ENSRROG00000044472	POC1A	100	91.086	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033763	Poc1a	100	89.315	ENSSBOG00000027902	POC1A	100	90.244	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0033763	Poc1a	96	82.143	ENSSMAG00000013505	POC1A	96	68.719	Scophthalmus_maximus
MGP_SPRETEiJ_G0033763	Poc1a	94	82.143	ENSSDUG00000016161	POC1A	97	63.596	Seriola_dumerili
MGP_SPRETEiJ_G0033763	Poc1a	94	82.143	ENSSLDG00000003828	POC1A	97	78.146	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0033763	Poc1a	93	83.456	ENSSPUG00000008656	POC1A	99	62.471	Sphenodon_punctatus
MGP_SPRETEiJ_G0033763	Poc1a	98	59.305	ENSSPAG00000020330	POC1A	93	59.305	Stegastes_partitus
MGP_SPRETEiJ_G0033763	Poc1a	100	88.943	ENSSSCG00000011426	POC1A	100	88.943	Sus_scrofa
MGP_SPRETEiJ_G0033763	Poc1a	98	73.684	ENSTGUG00000006036	POC1A	99	73.684	Taeniopygia_guttata
MGP_SPRETEiJ_G0033763	Poc1a	96	65.169	ENSTRUG00000007900	POC1A	96	65.169	Takifugu_rubripes
MGP_SPRETEiJ_G0033763	Poc1a	85	72.517	ENSTNIG00000014818	POC1A	98	72.517	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0033763	Poc1a	100	86.978	ENSTTRG00000016798	POC1A	100	86.978	Tursiops_truncatus
MGP_SPRETEiJ_G0033763	Poc1a	100	90.418	ENSUAMG00000020816	POC1A	100	90.418	Ursus_americanus
MGP_SPRETEiJ_G0033763	Poc1a	98	90.515	ENSUMAG00000021482	POC1A	100	90.515	Ursus_maritimus
MGP_SPRETEiJ_G0033763	Poc1a	97	66.667	ENSXETG00000010813	poc1a	95	66.667	Xenopus_tropicalis