EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033782 (Gene tree)
Gene ID: -
Gene Symbol: Rbm15b
Alias: 1810017N16Rik
Full Name: RNA binding motif protein 15B
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 6513 bases
Position: chr9:107734225-107740737
Accession: 1923598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0093326	RRM_1	PF00076.22	1.3e-29	1	2
MGP_SPRETEiJ_P0093326	RRM_1	PF00076.22	1.3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0093326	-	6513	-	MGP_SPRETEiJ_P0093326	887 (aa)	-	UPI00019B2404
MGP_SPRETEiJ_T0093327	-	682	-	MGP_SPRETEiJ_P0093327	192 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0033782	Rbm15b	85	47.181	MGP_SPRETEiJ_G0026451	Rbm15	82	46.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033782	Rbm15b	100	92.705	ENSG00000259956	RBM15B	100	93.378	Homo_sapiens
MGP_SPRETEiJ_G0033782	Rbm15b	89	88.945	ENSAMEG00000009353	RBM15B	99	88.945	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0033782	Rbm15b	85	53.608	ENSAPEG00000023123	rbm15b	88	53.069	Amphiprion_percula
MGP_SPRETEiJ_G0033782	Rbm15b	83	52.375	ENSATEG00000008514	rbm15b	87	52.699	Anabas_testudineus
MGP_SPRETEiJ_G0033782	Rbm15b	86	76.953	ENSACAG00000007689	RBM15B	91	75.871	Anolis_carolinensis
MGP_SPRETEiJ_G0033782	Rbm15b	100	87.696	ENSANAG00000026817	RBM15B	100	100.000	Aotus_nancymaae
MGP_SPRETEiJ_G0033782	Rbm15b	85	53.512	ENSACLG00000013346	rbm15b	88	52.718	Astatotilapia_calliptera
MGP_SPRETEiJ_G0033782	Rbm15b	63	54.276	ENSAMXG00000025805	rbm15b	90	55.806	Astyanax_mexicanus
MGP_SPRETEiJ_G0033782	Rbm15b	100	91.620	ENSBTAG00000006500	RBM15B	100	92.737	Bos_taurus
MGP_SPRETEiJ_G0033782	Rbm15b	100	91.222	ENSCAFG00000010266	RBM15B	100	94.222	Canis_familiaris
MGP_SPRETEiJ_G0033782	Rbm15b	100	91.518	ENSCHIG00000016926	-	100	92.144	Capra_hircus
MGP_SPRETEiJ_G0033782	Rbm15b	100	91.704	ENSCPOG00000031950	RBM15B	100	92.377	Cavia_porcellus
MGP_SPRETEiJ_G0033782	Rbm15b	100	92.593	ENSCSAG00000018788	RBM15B	100	93.266	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0033782	Rbm15b	67	94.992	ENSCHOG00000009175	RBM15B	99	94.975	Choloepus_hoffmanni
MGP_SPRETEiJ_G0033782	Rbm15b	100	97.643	ENSCGRG00001015903	Rbm15b	100	97.643	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033782	Rbm15b	85	51.613	ENSCSEG00000014504	rbm15b	86	51.675	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0033782	Rbm15b	87	53.275	ENSCVAG00000018913	rbm15b	88	53.053	Cyprinodon_variegatus
MGP_SPRETEiJ_G0033782	Rbm15b	87	59.566	ENSDARG00000078966	rbm15b	99	61.687	Danio_rerio
MGP_SPRETEiJ_G0033782	Rbm15b	67	91.792	ENSDNOG00000036695	RBM15B	96	91.792	Dasypus_novemcinctus
MGP_SPRETEiJ_G0033782	Rbm15b	53	90.486	ENSETEG00000008333	RBM15B	53	90.486	Echinops_telfairi
MGP_SPRETEiJ_G0033782	Rbm15b	100	90.869	ENSEASG00005012861	RBM15B	100	91.537	Equus_asinus_asinus
MGP_SPRETEiJ_G0033782	Rbm15b	100	91.518	ENSECAG00000011809	RBM15B	100	92.076	Equus_caballus
MGP_SPRETEiJ_G0033782	Rbm15b	85	57.541	ENSELUG00000000768	rbm15b	86	56.101	Esox_lucius
MGP_SPRETEiJ_G0033782	Rbm15b	77	80.321	ENSFALG00000014346	RBM15B	100	80.321	Ficedula_albicollis
MGP_SPRETEiJ_G0033782	Rbm15b	93	74.681	ENSGALG00000050969	RBM15B	81	79.581	Gallus_gallus
MGP_SPRETEiJ_G0033782	Rbm15b	86	94.868	ENSGGOG00000001037	RBM15B	95	93.888	Gorilla_gorilla
MGP_SPRETEiJ_G0033782	Rbm15b	85	53.581	ENSHBUG00000009487	rbm15b	88	52.845	Haplochromis_burtoni
MGP_SPRETEiJ_G0033782	Rbm15b	100	91.695	ENSHGLG00000020882	-	100	92.817	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0033782	Rbm15b	85	49.217	ENSHCOG00000014262	rbm15b	90	50.000	Hippocampus_comes
MGP_SPRETEiJ_G0033782	Rbm15b	84	58.988	ENSIPUG00000008345	rbm15b	87	58.094	Ictalurus_punctatus
MGP_SPRETEiJ_G0033782	Rbm15b	87	97.677	ENSSTOG00000008657	RBM15B	100	97.677	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0033782	Rbm15b	88	91.772	ENSJJAG00000024067	Rbm15b	94	93.923	Jaculus_jaculus
MGP_SPRETEiJ_G0033782	Rbm15b	100	62.760	ENSLACG00000016607	RBM15B	86	68.857	Latimeria_chalumnae
MGP_SPRETEiJ_G0033782	Rbm15b	100	61.419	ENSLOCG00000013409	rbm15b	87	66.449	Lepisosteus_oculatus
MGP_SPRETEiJ_G0033782	Rbm15b	64	95.213	ENSLAFG00000012673	RBM15B	100	95.213	Loxodonta_africana
MGP_SPRETEiJ_G0033782	Rbm15b	100	93.483	ENSMFAG00000029773	RBM15B	100	93.708	Macaca_fascicularis
MGP_SPRETEiJ_G0033782	Rbm15b	83	53.394	ENSMAMG00000010212	rbm15b	88	52.332	Mastacembelus_armatus
MGP_SPRETEiJ_G0033782	Rbm15b	64	84.099	ENSMGAG00000002238	RBM15B	100	84.099	Meleagris_gallopavo
MGP_SPRETEiJ_G0033782	Rbm15b	100	97.525	ENSMOCG00000001646	Rbm15b	100	97.525	Microtus_ochrogaster
MGP_SPRETEiJ_G0033782	Rbm15b	64	86.018	ENSMODG00000011903	RBM15B	100	86.018	Monodelphis_domestica
MGP_SPRETEiJ_G0033782	Rbm15b	85	52.949	ENSMALG00000020264	rbm15b	95	52.658	Monopterus_albus
MGP_SPRETEiJ_G0033782	Rbm15b	100	99.549	MGP_CAROLIEiJ_G0032637	Rbm15b	100	99.549	Mus_caroli
MGP_SPRETEiJ_G0033782	Rbm15b	100	100.000	ENSMUSG00000074102	Rbm15b	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0033782	Rbm15b	100	99.099	MGP_PahariEiJ_G0015504	Rbm15b	100	99.099	Mus_pahari
MGP_SPRETEiJ_G0033782	Rbm15b	72	95.925	ENSMPUG00000019339	RBM15B	100	95.925	Mustela_putorius_furo
MGP_SPRETEiJ_G0033782	Rbm15b	100	89.899	ENSNGAG00000022552	Rbm15b	100	89.562	Nannospalax_galili
MGP_SPRETEiJ_G0033782	Rbm15b	84	94.511	ENSNLEG00000018541	RBM15B	93	94.920	Nomascus_leucogenys
MGP_SPRETEiJ_G0033782	Rbm15b	64	86.165	ENSMEUG00000006207	RBM15B	100	86.165	Notamacropus_eugenii
MGP_SPRETEiJ_G0033782	Rbm15b	100	91.573	ENSODEG00000020563	-	100	92.697	Octodon_degus
MGP_SPRETEiJ_G0033782	Rbm15b	64	53.234	ENSONIG00000021253	rbm15b	99	54.817	Oreochromis_niloticus
MGP_SPRETEiJ_G0033782	Rbm15b	56	67.066	ENSOANG00000001071	-	100	67.864	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0033782	Rbm15b	64	92.376	ENSOCUG00000010322	RBM15B	100	92.376	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0033782	Rbm15b	87	53.442	ENSORLG00000025754	rbm15b	88	52.497	Oryzias_latipes
MGP_SPRETEiJ_G0033782	Rbm15b	87	53.759	ENSORLG00020022257	rbm15b	88	52.941	Oryzias_latipes_hni
MGP_SPRETEiJ_G0033782	Rbm15b	64	96.454	ENSOGAG00000001996	RBM15B	100	96.454	Otolemur_garnettii
MGP_SPRETEiJ_G0033782	Rbm15b	67	95.455	ENSOARG00000007757	RBM15B	96	95.470	Ovis_aries
MGP_SPRETEiJ_G0033782	Rbm15b	67	65.116	ENSPKIG00000010201	rbm15b	100	65.282	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0033782	Rbm15b	64	83.540	ENSPSIG00000000576	RBM15B	100	83.540	Pelodiscus_sinensis
MGP_SPRETEiJ_G0033782	Rbm15b	86	95.556	ENSPVAG00000003221	RBM15B	86	95.556	Pteropus_vampyrus
MGP_SPRETEiJ_G0033782	Rbm15b	85	53.444	ENSPNYG00000019263	rbm15b	88	52.525	Pundamilia_nyererei
MGP_SPRETEiJ_G0033782	Rbm15b	100	98.760	ENSRNOG00000014161	Rbm15b	100	98.760	Rattus_norvegicus
MGP_SPRETEiJ_G0033782	Rbm15b	89	95.346	ENSRROG00000017232	RBM15B	89	94.458	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0033782	Rbm15b	64	86.042	ENSSHAG00000010976	RBM15B	100	86.042	Sarcophilus_harrisii
MGP_SPRETEiJ_G0033782	Rbm15b	100	95.526	ENSSSCG00000011420	RBM15B	100	95.526	Sus_scrofa
MGP_SPRETEiJ_G0033782	Rbm15b	64	84.629	ENSTGUG00000004850	RBM15B	100	84.629	Taeniopygia_guttata
MGP_SPRETEiJ_G0033782	Rbm15b	100	83.817	ENSTBEG00000008724	RBM15B	100	84.281	Tupaia_belangeri
MGP_SPRETEiJ_G0033782	Rbm15b	100	89.138	ENSTTRG00000001431	RBM15B	70	95.338	Tursiops_truncatus