EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0033957 (Gene tree)
Gene ID: -
Gene Symbol: Ttc21a
Alias: 4921538N17Rik|Thm2
Full Name: tetratricopeptide repeat domain 21A
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 38666 bases
Position: chr9:121723483-121762148
Accession: 1921302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0094318	PPR	PF01535.20	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0094321	-	827	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0094318	-	4179	-	MGP_SPRETEiJ_P0094318	1314 (aa)	-	-
MGP_SPRETEiJ_T0094319	-	4041	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0094320	-	3311	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0033957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0033957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0033957	Ttc21a	55	82.207	ENSBTAG00000010477	TTC21A	100	82.207	Bos_taurus
MGP_SPRETEiJ_G0033957	Ttc21a	55	82.621	ENSCHIG00000018055	TTC21A	100	82.621	Capra_hircus
MGP_SPRETEiJ_G0033957	Ttc21a	99	89.587	ENSCGRG00001020151	Ttc21a	100	89.587	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0033957	Ttc21a	99	89.587	ENSCGRG00000012945	Ttc21a	95	89.587	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0033957	Ttc21a	99	69.442	ENSDORG00000027538	Ttc21a	99	69.442	Dipodomys_ordii
MGP_SPRETEiJ_G0033957	Ttc21a	87	76.026	ENSETEG00000018753	TTC21A	87	76.026	Echinops_telfairi
MGP_SPRETEiJ_G0033957	Ttc21a	100	82.814	ENSJJAG00000005140	Ttc21a	100	82.814	Jaculus_jaculus
MGP_SPRETEiJ_G0033957	Ttc21a	100	99.163	ENSMUSG00000032514	Ttc21a	100	99.163	Mus_musculus
MGP_SPRETEiJ_G0033957	Ttc21a	100	96.347	MGP_PahariEiJ_G0015676	Ttc21a	100	96.347	Mus_pahari
MGP_SPRETEiJ_G0033957	Ttc21a	100	75.571	ENSPPRG00000012924	TTC21A	100	75.571	Panthera_pardus
MGP_SPRETEiJ_G0033957	Ttc21a	99	91.241	ENSPEMG00000010809	Ttc21a	99	91.241	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0033957	Ttc21a	100	95.282	ENSRNOG00000034089	Ttc21a	100	95.282	Rattus_norvegicus
MGP_SPRETEiJ_G0033957	Ttc21a	100	77.567	ENSUAMG00000020073	TTC21A	99	84.602	Ursus_americanus