EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0034249 (Gene tree)
Gene ID: -
Gene Symbol: Htatsf1
Alias: 1600023H17Rik|2600017A12Rik|2700077B20Rik|TAT-SF1
Full Name: HIV TAT specific factor 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 13764 bases
Position: chrX:39530552-39544315
Accession: 1919709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0095259	RRM_1	PF00076.22	4.4e-16	1	2
MGP_SPRETEiJ_P0095259	RRM_1	PF00076.22	4.4e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0095258	-	1127	-	MGP_SPRETEiJ_P0095258	194 (aa)	-	-
MGP_SPRETEiJ_T0095259	-	2810	-	MGP_SPRETEiJ_P0095259	757 (aa)	-	-
MGP_SPRETEiJ_T0095261	-	2660	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0095260	-	2185	-	MGP_SPRETEiJ_P0095260	583 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0034249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0034249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.885	ENSG00000102241	HTATSF1	100	87.347	Homo_sapiens
MGP_SPRETEiJ_G0034249	Htatsf1	50	65.039	ENSAPOG00000009823	htatsf1	81	64.595	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.587	ENSAMEG00000002921	HTATSF1	98	70.528	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0034249	Htatsf1	50	63.452	ENSAOCG00000020994	htatsf1	80	63.369	Amphiprion_ocellaris
MGP_SPRETEiJ_G0034249	Htatsf1	50	63.613	ENSAPEG00000016432	htatsf1	80	62.834	Amphiprion_percula
MGP_SPRETEiJ_G0034249	Htatsf1	95	65.062	ENSANAG00000027986	-	93	65.007	Aotus_nancymaae
MGP_SPRETEiJ_G0034249	Htatsf1	93	71.871	ENSANAG00000025458	-	96	72.052	Aotus_nancymaae
MGP_SPRETEiJ_G0034249	Htatsf1	50	64.467	ENSAMXG00000008387	htatsf1	79	64.000	Astyanax_mexicanus
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.516	ENSBTAG00000054942	HTATSF1	98	72.585	Bos_taurus
MGP_SPRETEiJ_G0034249	Htatsf1	100	66.230	ENSBTAG00000032711	HTATSF1	98	69.251	Bos_taurus
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.516	ENSBTAG00000055212	HTATSF1	98	72.585	Bos_taurus
MGP_SPRETEiJ_G0034249	Htatsf1	99	74.474	ENSCJAG00000003676	HTATSF1	97	74.457	Callithrix_jacchus
MGP_SPRETEiJ_G0034249	Htatsf1	99	74.282	ENSCAFG00000023294	HTATSF1	98	73.219	Canis_familiaris
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.762	ENSCAFG00020024635	HTATSF1	98	71.705	Canis_lupus_dingo
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.622	ENSCHIG00000000312	HTATSF1	98	73.174	Capra_hircus
MGP_SPRETEiJ_G0034249	Htatsf1	99	74.967	ENSTSYG00000028876	HTATSF1	98	75.899	Carlito_syrichta
MGP_SPRETEiJ_G0034249	Htatsf1	99	70.681	ENSCCAG00000025329	-	97	71.837	Cebus_capucinus
MGP_SPRETEiJ_G0034249	Htatsf1	99	75.362	ENSCCAG00000022701	-	97	75.510	Cebus_capucinus
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.622	ENSCATG00000029963	HTATSF1	97	75.067	Cercocebus_atys
MGP_SPRETEiJ_G0034249	Htatsf1	99	69.948	ENSCLAG00000002718	HTATSF1	98	71.277	Chinchilla_lanigera
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.966	ENSCSAG00000007505	HTATSF1	97	75.202	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0034249	Htatsf1	50	70.466	ENSCPBG00000026092	HTATSF1	91	66.507	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.835	ENSCANG00000028495	HTATSF1	97	75.067	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0034249	Htatsf1	99	80.745	ENSCGRG00001021602	Htatsf1	98	80.574	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0034249	Htatsf1	91	74.860	ENSCGRG00000002085	Htatsf1	98	74.538	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0034249	Htatsf1	99	70.155	ENSDNOG00000002254	HTATSF1	98	71.616	Dasypus_novemcinctus
MGP_SPRETEiJ_G0034249	Htatsf1	90	43.353	ENSETEG00000006377	-	70	48.162	Echinops_telfairi
MGP_SPRETEiJ_G0034249	Htatsf1	81	74.806	ENSEASG00005003440	HTATSF1	98	71.669	Equus_asinus_asinus
MGP_SPRETEiJ_G0034249	Htatsf1	81	75.117	ENSECAG00000009156	HTATSF1	98	71.928	Equus_caballus
MGP_SPRETEiJ_G0034249	Htatsf1	99	61.788	ENSEEUG00000010668	HTATSF1	97	62.566	Erinaceus_europaeus
MGP_SPRETEiJ_G0034249	Htatsf1	100	72.997	ENSFCAG00000031924	HTATSF1	98	72.823	Felis_catus
MGP_SPRETEiJ_G0034249	Htatsf1	51	66.751	ENSFALG00000003728	HTATSF1	87	66.005	Ficedula_albicollis
MGP_SPRETEiJ_G0034249	Htatsf1	99	71.542	ENSFDAG00000008617	HTATSF1	98	71.979	Fukomys_damarensis
MGP_SPRETEiJ_G0034249	Htatsf1	50	67.442	ENSGALG00000006410	HTATSF1	84	67.442	Gallus_gallus
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.885	ENSGGOG00000026072	HTATSF1	96	75.606	Gorilla_gorilla
MGP_SPRETEiJ_G0034249	Htatsf1	98	71.867	ENSHGLG00000005328	HTATSF1	98	71.979	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0034249	Htatsf1	50	61.069	ENSHCOG00000009056	htatsf1	94	59.005	Hippocampus_comes
MGP_SPRETEiJ_G0034249	Htatsf1	50	64.304	ENSIPUG00000017828	htatsf1	76	64.365	Ictalurus_punctatus
MGP_SPRETEiJ_G0034249	Htatsf1	99	76.197	ENSSTOG00000012505	HTATSF1	97	75.507	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0034249	Htatsf1	50	44.388	ENSLOCG00000015118	htatsf1	88	42.043	Lepisosteus_oculatus
MGP_SPRETEiJ_G0034249	Htatsf1	99	66.623	ENSLAFG00000014307	HTATSF1	89	74.472	Loxodonta_africana
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.753	ENSMFAG00000044705	HTATSF1	97	75.202	Macaca_fascicularis
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.622	ENSMMUG00000006450	HTATSF1	97	75.067	Macaca_mulatta
MGP_SPRETEiJ_G0034249	Htatsf1	99	69.548	ENSMNEG00000024084	HTATSF1	99	70.424	Macaca_nemestrina
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.885	ENSMLEG00000035511	HTATSF1	97	75.067	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0034249	Htatsf1	50	62.944	ENSMAMG00000021225	htatsf1	83	62.567	Mastacembelus_armatus
MGP_SPRETEiJ_G0034249	Htatsf1	99	81.579	ENSMAUG00000007235	Htatsf1	98	79.947	Mesocricetus_auratus
MGP_SPRETEiJ_G0034249	Htatsf1	99	74.219	ENSMICG00000009348	HTATSF1	98	74.570	Microcebus_murinus
MGP_SPRETEiJ_G0034249	Htatsf1	99	78.562	ENSMOCG00000022370	-	94	76.383	Microtus_ochrogaster
MGP_SPRETEiJ_G0034249	Htatsf1	100	80.207	ENSMOCG00000023007	-	98	79.260	Microtus_ochrogaster
MGP_SPRETEiJ_G0034249	Htatsf1	52	61.165	ENSMMOG00000011013	htatsf1	90	61.165	Mola_mola
MGP_SPRETEiJ_G0034249	Htatsf1	52	70.426	ENSMODG00000014087	-	87	70.426	Monodelphis_domestica
MGP_SPRETEiJ_G0034249	Htatsf1	54	57.773	ENSMALG00000019977	htatsf1	94	57.773	Monopterus_albus
MGP_SPRETEiJ_G0034249	Htatsf1	100	95.773	MGP_CAROLIEiJ_G0033094	Htatsf1	100	95.773	Mus_caroli
MGP_SPRETEiJ_G0034249	Htatsf1	100	99.207	ENSMUSG00000067873	Htatsf1	100	99.207	Mus_musculus
MGP_SPRETEiJ_G0034249	Htatsf1	99	71.320	ENSMPUG00000001901	HTATSF1	98	71.964	Mustela_putorius_furo
MGP_SPRETEiJ_G0034249	Htatsf1	99	68.538	ENSMLUG00000028418	-	98	67.852	Myotis_lucifugus
MGP_SPRETEiJ_G0034249	Htatsf1	99	66.045	ENSMLUG00000009234	-	97	65.147	Myotis_lucifugus
MGP_SPRETEiJ_G0034249	Htatsf1	98	80.754	ENSNGAG00000017831	Htatsf1	97	80.888	Nannospalax_galili
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.168	ENSNLEG00000002746	HTATSF1	96	75.202	Nomascus_leucogenys
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.205	ENSOCUG00000012570	HTATSF1	98	74.502	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0034249	Htatsf1	52	62.044	ENSORLG00015002268	htatsf1	90	61.687	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0034249	Htatsf1	98	72.559	ENSOGAG00000005565	HTATSF1	98	73.087	Otolemur_garnettii
MGP_SPRETEiJ_G0034249	Htatsf1	99	68.205	ENSOARG00000000481	-	98	68.564	Ovis_aries
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.516	ENSOARG00000011215	-	98	72.454	Ovis_aries
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.885	ENSPPAG00000024268	HTATSF1	96	75.606	Pan_paniscus
MGP_SPRETEiJ_G0034249	Htatsf1	100	73.307	ENSPPRG00000014209	HTATSF1	98	73.138	Panthera_pardus
MGP_SPRETEiJ_G0034249	Htatsf1	93	72.293	ENSPTIG00000016887	HTATSF1	94	72.166	Panthera_tigris_altaica
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.885	ENSPTRG00000044591	HTATSF1	96	75.606	Pan_troglodytes
MGP_SPRETEiJ_G0034249	Htatsf1	99	63.123	ENSPANG00000010946	HTATSF1	96	63.673	Papio_anubis
MGP_SPRETEiJ_G0034249	Htatsf1	50	62.935	ENSPMGG00000006172	htatsf1	82	62.865	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0034249	Htatsf1	98	82.796	ENSPEMG00000022397	Htatsf1	98	82.527	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0034249	Htatsf1	50	66.753	ENSPCIG00000018896	-	95	61.502	Phascolarctos_cinereus
MGP_SPRETEiJ_G0034249	Htatsf1	50	62.944	ENSPLAG00000007532	htatsf1	82	62.133	Poecilia_latipinna
MGP_SPRETEiJ_G0034249	Htatsf1	81	78.080	ENSPPYG00000020765	HTATSF1	81	77.868	Pongo_abelii
MGP_SPRETEiJ_G0034249	Htatsf1	93	65.581	ENSPCAG00000010576	HTATSF1	83	67.267	Procavia_capensis
MGP_SPRETEiJ_G0034249	Htatsf1	99	75.619	ENSPCOG00000021823	HTATSF1	98	75.894	Propithecus_coquereli
MGP_SPRETEiJ_G0034249	Htatsf1	99	68.533	ENSPVAG00000010281	HTATSF1	98	61.579	Pteropus_vampyrus
MGP_SPRETEiJ_G0034249	Htatsf1	50	61.858	ENSPNAG00000006166	htatsf1	79	64.888	Pygocentrus_nattereri
MGP_SPRETEiJ_G0034249	Htatsf1	100	87.516	ENSRNOG00000027761	Htatsf1	98	87.122	Rattus_norvegicus
MGP_SPRETEiJ_G0034249	Htatsf1	99	63.255	ENSRBIG00000035486	HTATSF1	96	64.690	Rhinopithecus_bieti
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.572	ENSRROG00000021939	HTATSF1	97	74.798	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0034249	Htatsf1	99	71.900	ENSSBOG00000017914	-	98	71.486	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.607	ENSSBOG00000027186	-	98	74.198	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0034249	Htatsf1	50	70.079	ENSSHAG00000006440	-	99	69.072	Sarcophilus_harrisii
MGP_SPRETEiJ_G0034249	Htatsf1	50	63.990	ENSSFOG00015012002	htatsf1	82	63.990	Scleropages_formosus
MGP_SPRETEiJ_G0034249	Htatsf1	50	63.131	ENSSLDG00000016880	htatsf1	96	58.447	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0034249	Htatsf1	99	60.474	ENSSARG00000005193	HTATSF1	78	69.031	Sorex_araneus
MGP_SPRETEiJ_G0034249	Htatsf1	50	66.667	ENSSPUG00000014767	HTATSF1	84	66.667	Sphenodon_punctatus
MGP_SPRETEiJ_G0034249	Htatsf1	99	66.316	ENSSSCG00000023062	HTATSF1	97	67.198	Sus_scrofa
MGP_SPRETEiJ_G0034249	Htatsf1	85	64.969	ENSTTRG00000002269	HTATSF1	92	64.892	Tursiops_truncatus
MGP_SPRETEiJ_G0034249	Htatsf1	99	73.958	ENSUAMG00000012048	HTATSF1	98	72.441	Ursus_americanus
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.542	ENSUMAG00000010393	HTATSF1	98	71.171	Ursus_maritimus
MGP_SPRETEiJ_G0034249	Htatsf1	91	65.522	ENSVPAG00000004569	HTATSF1	98	64.978	Vicugna_pacos
MGP_SPRETEiJ_G0034249	Htatsf1	99	72.716	ENSVVUG00000024802	HTATSF1	98	71.651	Vulpes_vulpes