EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0034461 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l
Alias: D330021P09Rik
Full Name: excision repair cross-complementing rodent repair deficiency complementation group 6 like
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 16687 bases
Position: chrX:84320548-84337234
Accession: 2654144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0096142	ResIII	PF04851.15	1.2e-13	1	1
MGP_SPRETEiJ_P0096142	DEAD	PF00270.29	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0096142	-	4983	-	MGP_SPRETEiJ_P0096142	1238 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0034461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0034461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.893	ENSG00000186871	ERCC6L	99	72.633	Homo_sapiens
MGP_SPRETEiJ_G0034461	Ercc6l	53	62.236	ENSAPOG00000011392	ercc6l	98	62.236	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0034461	Ercc6l	99	70.079	ENSAMEG00000005804	ERCC6L	100	69.817	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0034461	Ercc6l	69	54.402	ENSAOCG00000016323	ercc6l	97	46.051	Amphiprion_ocellaris
MGP_SPRETEiJ_G0034461	Ercc6l	65	56.074	ENSAOCG00000016285	-	97	46.192	Amphiprion_ocellaris
MGP_SPRETEiJ_G0034461	Ercc6l	97	46.110	ENSAPEG00000022499	ercc6l	98	45.622	Amphiprion_percula
MGP_SPRETEiJ_G0034461	Ercc6l	73	57.500	ENSAPEG00000022533	ERCC6L	91	57.500	Amphiprion_percula
MGP_SPRETEiJ_G0034461	Ercc6l	75	61.570	ENSATEG00000012969	ercc6l	73	61.570	Anabas_testudineus
MGP_SPRETEiJ_G0034461	Ercc6l	53	67.069	ENSACAG00000029354	-	91	68.175	Anolis_carolinensis
MGP_SPRETEiJ_G0034461	Ercc6l	89	51.832	ENSACAG00000001226	-	99	51.184	Anolis_carolinensis
MGP_SPRETEiJ_G0034461	Ercc6l	53	67.069	ENSACAG00000028866	-	88	68.175	Anolis_carolinensis
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.724	ENSANAG00000022378	ERCC6L	99	71.463	Aotus_nancymaae
MGP_SPRETEiJ_G0034461	Ercc6l	99	70.860	ENSBTAG00000005607	ERCC6L	99	70.621	Bos_taurus
MGP_SPRETEiJ_G0034461	Ercc6l	99	70.612	ENSCJAG00000022332	ERCC6L	99	69.873	Callithrix_jacchus
MGP_SPRETEiJ_G0034461	Ercc6l	99	69.817	ENSCAFG00000023690	ERCC6L	98	69.420	Canis_familiaris
MGP_SPRETEiJ_G0034461	Ercc6l	90	69.163	ENSCAFG00020021313	ERCC6L	99	68.811	Canis_lupus_dingo
MGP_SPRETEiJ_G0034461	Ercc6l	99	70.701	ENSCHIG00000009967	ERCC6L	99	70.462	Capra_hircus
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.383	ENSTSYG00000013701	ERCC6L	99	71.065	Carlito_syrichta
MGP_SPRETEiJ_G0034461	Ercc6l	99	69.656	ENSCPOG00000011407	ERCC6L	99	69.255	Cavia_porcellus
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.224	ENSCCAG00000023790	ERCC6L	99	71.145	Cebus_capucinus
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.518	ENSCATG00000038031	ERCC6L	99	72.099	Cercocebus_atys
MGP_SPRETEiJ_G0034461	Ercc6l	99	69.944	ENSCLAG00000015218	-	99	70.311	Chinchilla_lanigera
MGP_SPRETEiJ_G0034461	Ercc6l	99	67.871	ENSCLAG00000017785	-	99	67.791	Chinchilla_lanigera
MGP_SPRETEiJ_G0034461	Ercc6l	98	72.720	ENSCSAG00000011173	ERCC6L	98	72.294	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0034461	Ercc6l	98	53.651	ENSCPBG00000011965	ERCC6L	82	73.242	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.701	ENSCANG00000016909	ERCC6L	99	71.463	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0034461	Ercc6l	99	83.827	ENSCGRG00001016668	Ercc6l	99	83.667	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0034461	Ercc6l	99	83.827	ENSCGRG00000006223	Ercc6l	99	83.667	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0034461	Ercc6l	55	60.876	ENSCVAG00000008090	ercc6l	96	60.584	Cyprinodon_variegatus
MGP_SPRETEiJ_G0034461	Ercc6l	66	62.024	ENSDARG00000002479	ercc6l	60	62.024	Danio_rerio
MGP_SPRETEiJ_G0034461	Ercc6l	99	69.658	ENSDNOG00000032356	ERCC6L	99	69.444	Dasypus_novemcinctus
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.061	ENSDORG00000007865	Ercc6l	99	70.981	Dipodomys_ordii
MGP_SPRETEiJ_G0034461	Ercc6l	79	82.998	ENSETEG00000018007	ERCC6L	90	82.998	Echinops_telfairi
MGP_SPRETEiJ_G0034461	Ercc6l	90	71.050	ENSEASG00005007025	ERCC6L	99	71.101	Equus_asinus_asinus
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.599	ENSECAG00000002513	ERCC6L	99	71.565	Equus_caballus
MGP_SPRETEiJ_G0034461	Ercc6l	93	82.067	ENSEEUG00000015724	ERCC6L	93	81.915	Erinaceus_europaeus
MGP_SPRETEiJ_G0034461	Ercc6l	98	46.334	ENSELUG00000007917	ercc6l	62	66.294	Esox_lucius
MGP_SPRETEiJ_G0034461	Ercc6l	99	69.810	ENSFCAG00000012038	ERCC6L	99	69.548	Felis_catus
MGP_SPRETEiJ_G0034461	Ercc6l	96	48.466	ENSFALG00000011797	ERCC6L	99	48.585	Ficedula_albicollis
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.030	ENSFDAG00000019713	ERCC6L	99	70.630	Fukomys_damarensis
MGP_SPRETEiJ_G0034461	Ercc6l	52	60.555	ENSFHEG00000007269	-	94	60.555	Fundulus_heteroclitus
MGP_SPRETEiJ_G0034461	Ercc6l	58	62.293	ENSFHEG00000007205	ercc6l	73	54.415	Fundulus_heteroclitus
MGP_SPRETEiJ_G0034461	Ercc6l	59	66.982	ENSGALG00000003881	ERCC6L	58	66.441	Gallus_gallus
MGP_SPRETEiJ_G0034461	Ercc6l	90	50.847	ENSGAGG00000018784	ERCC6L	99	51.027	Gopherus_agassizii
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.893	ENSGGOG00000022367	ERCC6L	99	72.633	Gorilla_gorilla
MGP_SPRETEiJ_G0034461	Ercc6l	80	62.366	ENSHBUG00000007810	ercc6l	99	46.017	Haplochromis_burtoni
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.269	ENSHGLG00000016594	ERCC6L	99	71.166	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.269	ENSHGLG00100003339	ERCC6L	99	71.166	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0034461	Ercc6l	59	60.782	ENSHCOG00000001051	ercc6l	60	60.782	Hippocampus_comes
MGP_SPRETEiJ_G0034461	Ercc6l	58	62.586	ENSIPUG00000016117	ercc6l	57	62.724	Ictalurus_punctatus
MGP_SPRETEiJ_G0034461	Ercc6l	98	72.787	ENSJJAG00000022875	Ercc6l	98	72.869	Jaculus_jaculus
MGP_SPRETEiJ_G0034461	Ercc6l	66	60.667	ENSKMAG00000011587	ercc6l	99	44.090	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0034461	Ercc6l	73	60.422	ENSLBEG00000000091	ercc6l	79	60.290	Labrus_bergylta
MGP_SPRETEiJ_G0034461	Ercc6l	98	49.605	ENSLACG00000002634	ERCC6L	99	49.486	Latimeria_chalumnae
MGP_SPRETEiJ_G0034461	Ercc6l	98	47.802	ENSLOCG00000013925	ercc6l	99	47.704	Lepisosteus_oculatus
MGP_SPRETEiJ_G0034461	Ercc6l	99	68.396	ENSLAFG00000014985	ERCC6L	100	68.131	Loxodonta_africana
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.518	ENSMFAG00000045509	ERCC6L	99	72.099	Macaca_fascicularis
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.417	ENSMMUG00000012957	ERCC6L	99	71.997	Macaca_mulatta
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.597	ENSMNEG00000030867	ERCC6L	99	72.178	Macaca_nemestrina
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.438	ENSMLEG00000000190	ERCC6L	99	72.019	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0034461	Ercc6l	61	59.536	ENSMAMG00000018595	ercc6l	60	59.536	Mastacembelus_armatus
MGP_SPRETEiJ_G0034461	Ercc6l	98	51.392	ENSMGAG00000002094	ERCC6L	99	52.029	Meleagris_gallopavo
MGP_SPRETEiJ_G0034461	Ercc6l	98	83.704	ENSMAUG00000015560	Ercc6l	98	83.292	Mesocricetus_auratus
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.917	ENSMICG00000035415	ERCC6L	99	71.383	Microcebus_murinus
MGP_SPRETEiJ_G0034461	Ercc6l	99	80.949	ENSMOCG00000021344	Ercc6l	99	81.029	Microtus_ochrogaster
MGP_SPRETEiJ_G0034461	Ercc6l	74	61.035	ENSMMOG00000020762	ercc6l	93	74.468	Mola_mola
MGP_SPRETEiJ_G0034461	Ercc6l	99	57.745	ENSMODG00000010916	ERCC6L	98	57.595	Monodelphis_domestica
MGP_SPRETEiJ_G0034461	Ercc6l	62	57.629	ENSMALG00000003561	-	59	58.355	Monopterus_albus
MGP_SPRETEiJ_G0034461	Ercc6l	100	96.613	MGP_CAROLIEiJ_G0033297	Ercc6l	100	96.613	Mus_caroli
MGP_SPRETEiJ_G0034461	Ercc6l	100	98.952	ENSMUSG00000051220	Ercc6l	100	98.952	Mus_musculus
MGP_SPRETEiJ_G0034461	Ercc6l	100	93.387	MGP_PahariEiJ_G0031835	Ercc6l	100	93.387	Mus_pahari
MGP_SPRETEiJ_G0034461	Ercc6l	99	68.546	ENSMPUG00000005291	ERCC6L	99	68.283	Mustela_putorius_furo
MGP_SPRETEiJ_G0034461	Ercc6l	98	70.897	ENSMLUG00000011670	ERCC6L	99	70.655	Myotis_lucifugus
MGP_SPRETEiJ_G0034461	Ercc6l	99	77.742	ENSNGAG00000021063	Ercc6l	99	77.342	Nannospalax_galili
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.337	ENSNLEG00000036284	ERCC6L	99	72.076	Nomascus_leucogenys
MGP_SPRETEiJ_G0034461	Ercc6l	98	69.206	ENSODEG00000002328	ERCC6L	99	68.525	Octodon_degus
MGP_SPRETEiJ_G0034461	Ercc6l	68	56.387	ENSONIG00000000589	ercc6l	99	47.843	Oreochromis_niloticus
MGP_SPRETEiJ_G0034461	Ercc6l	98	53.822	ENSOANG00000014708	ERCC6L	98	53.218	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0034461	Ercc6l	98	71.774	ENSOCUG00000008724	ERCC6L	99	71.774	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0034461	Ercc6l	55	57.496	ENSORLG00000024240	ercc6l	96	58.601	Oryzias_latipes
MGP_SPRETEiJ_G0034461	Ercc6l	81	59.463	ENSORLG00020014999	ercc6l	78	55.809	Oryzias_latipes_hni
MGP_SPRETEiJ_G0034461	Ercc6l	60	61.321	ENSOMEG00000009481	ercc6l	58	61.321	Oryzias_melastigma
MGP_SPRETEiJ_G0034461	Ercc6l	99	70.770	ENSOGAG00000031470	-	99	70.850	Otolemur_garnettii
MGP_SPRETEiJ_G0034461	Ercc6l	98	71.359	ENSOGAG00000034301	-	100	71.440	Otolemur_garnettii
MGP_SPRETEiJ_G0034461	Ercc6l	98	70.955	ENSOARG00000005908	ERCC6L	99	70.793	Ovis_aries
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.734	ENSPPAG00000031861	ERCC6L	99	72.474	Pan_paniscus
MGP_SPRETEiJ_G0034461	Ercc6l	98	70.412	ENSPPRG00000012408	ERCC6L	99	70.146	Panthera_pardus
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.734	ENSPTRG00000022023	ERCC6L	99	72.474	Pan_troglodytes
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.597	ENSPANG00000011598	ERCC6L	99	72.178	Papio_anubis
MGP_SPRETEiJ_G0034461	Ercc6l	81	66.246	ENSPKIG00000022325	ercc6l	70	65.826	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0034461	Ercc6l	98	52.229	ENSPSIG00000004789	ERCC6L	99	52.118	Pelodiscus_sinensis
MGP_SPRETEiJ_G0034461	Ercc6l	57	63.418	ENSPMGG00000023343	ercc6l	68	63.559	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0034461	Ercc6l	99	84.151	ENSPEMG00000007920	Ercc6l	99	83.749	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0034461	Ercc6l	62	55.626	ENSPMAG00000005064	ercc6l	98	57.665	Petromyzon_marinus
MGP_SPRETEiJ_G0034461	Ercc6l	99	58.421	ENSPCIG00000026973	ERCC6L	96	57.992	Phascolarctos_cinereus
MGP_SPRETEiJ_G0034461	Ercc6l	59	61.570	ENSPFOG00000010410	ercc6l	65	59.010	Poecilia_formosa
MGP_SPRETEiJ_G0034461	Ercc6l	61	60.523	ENSPLAG00000005575	ercc6l	64	64.441	Poecilia_latipinna
MGP_SPRETEiJ_G0034461	Ercc6l	59	61.705	ENSPMEG00000016911	ercc6l	61	61.456	Poecilia_mexicana
MGP_SPRETEiJ_G0034461	Ercc6l	55	64.317	ENSPREG00000017617	ercc6l	62	64.422	Poecilia_reticulata
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.893	ENSPPYG00000020461	ERCC6L	99	72.633	Pongo_abelii
MGP_SPRETEiJ_G0034461	Ercc6l	62	79.683	ENSPCAG00000002981	-	69	79.420	Procavia_capensis
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.178	ENSPCOG00000024286	ERCC6L	99	71.701	Propithecus_coquereli
MGP_SPRETEiJ_G0034461	Ercc6l	99	63.810	ENSPVAG00000013596	ERCC6L	99	63.542	Pteropus_vampyrus
MGP_SPRETEiJ_G0034461	Ercc6l	84	61.528	ENSPNYG00000013185	ercc6l	88	61.528	Pundamilia_nyererei
MGP_SPRETEiJ_G0034461	Ercc6l	58	66.667	ENSPNAG00000006556	ercc6l	81	55.904	Pygocentrus_nattereri
MGP_SPRETEiJ_G0034461	Ercc6l	99	88.701	ENSRNOG00000003208	Ercc6l	99	88.216	Rattus_norvegicus
MGP_SPRETEiJ_G0034461	Ercc6l	97	71.768	ENSRBIG00000036588	ERCC6L	99	71.335	Rhinopithecus_bieti
MGP_SPRETEiJ_G0034461	Ercc6l	99	72.121	ENSRROG00000042561	ERCC6L	99	71.701	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.145	ENSSBOG00000029416	ERCC6L	99	71.065	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0034461	Ercc6l	99	56.437	ENSSHAG00000012578	-	99	55.984	Sarcophilus_harrisii
MGP_SPRETEiJ_G0034461	Ercc6l	87	59.432	ENSSHAG00000001331	-	97	59.341	Sarcophilus_harrisii
MGP_SPRETEiJ_G0034461	Ercc6l	77	65.642	ENSSFOG00015009709	ercc6l	70	65.782	Scleropages_formosus
MGP_SPRETEiJ_G0034461	Ercc6l	51	42.633	ENSSFOG00015014557	-	50	42.543	Scleropages_formosus
MGP_SPRETEiJ_G0034461	Ercc6l	62	58.462	ENSSDUG00000013307	ercc6l	64	58.462	Seriola_dumerili
MGP_SPRETEiJ_G0034461	Ercc6l	58	60.744	ENSSLDG00000014910	ercc6l	65	60.744	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0034461	Ercc6l	76	68.170	ENSSPUG00000005866	ERCC6L	94	53.886	Sphenodon_punctatus
MGP_SPRETEiJ_G0034461	Ercc6l	65	53.817	ENSSPAG00000018472	ercc6l	99	44.123	Stegastes_partitus
MGP_SPRETEiJ_G0034461	Ercc6l	99	70.556	ENSSSCG00000021834	ERCC6L	99	70.453	Sus_scrofa
MGP_SPRETEiJ_G0034461	Ercc6l	98	43.792	ENSTRUG00000012053	ercc6l	99	45.605	Takifugu_rubripes
MGP_SPRETEiJ_G0034461	Ercc6l	99	70.556	ENSTTRG00000010777	ERCC6L	99	70.873	Tursiops_truncatus
MGP_SPRETEiJ_G0034461	Ercc6l	90	69.982	ENSUAMG00000015605	ERCC6L	99	69.515	Ursus_americanus
MGP_SPRETEiJ_G0034461	Ercc6l	90	70.158	ENSUMAG00000004863	ERCC6L	99	69.692	Ursus_maritimus
MGP_SPRETEiJ_G0034461	Ercc6l	99	71.247	ENSVPAG00000010950	ERCC6L	99	71.009	Vicugna_pacos
MGP_SPRETEiJ_G0034461	Ercc6l	99	69.683	ENSVVUG00000025512	ERCC6L	98	69.286	Vulpes_vulpes
MGP_SPRETEiJ_G0034461	Ercc6l	98	48.298	ENSXETG00000022574	ercc6l	99	48.839	Xenopus_tropicalis
MGP_SPRETEiJ_G0034461	Ercc6l	52	62.423	ENSXCOG00000011494	ercc6l	93	62.423	Xiphophorus_couchianus
MGP_SPRETEiJ_G0034461	Ercc6l	80	63.662	ENSXMAG00000000948	ercc6l	67	63.662	Xiphophorus_maculatus