EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0034497 (Gene tree)
Gene ID: -
Gene Symbol: Rtl3
Alias: D430021I08Rik|Mar3|Mart3|ZHC5|Zcchc5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 3558 bases
Position: chrX:89030198-89033755
Accession: 2685221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0096252	zf-CCHC	PF00098.23	0.00045	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0096252	-	2952	-	MGP_SPRETEiJ_P0096252	553 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0034497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0034497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0034497	Rtl3	99	47.594	ENSG00000179300	RTL3	99	51.872	Homo_sapiens
MGP_SPRETEiJ_G0034497	Rtl3	100	57.277	ENSTSYG00000008776	RTL3	100	57.277	Carlito_syrichta
MGP_SPRETEiJ_G0034497	Rtl3	100	76.703	ENSCGRG00001015952	Rtl3	100	76.703	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0034497	Rtl3	100	58.007	ENSDORG00000029995	Rtl3	100	57.473	Dipodomys_ordii
MGP_SPRETEiJ_G0034497	Rtl3	100	52.827	ENSECAG00000029496	RTL3	100	52.650	Equus_caballus
MGP_SPRETEiJ_G0034497	Rtl3	100	56.098	ENSSTOG00000027152	RTL3	100	56.743	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0034497	Rtl3	100	54.336	ENSJJAG00000014790	-	100	53.628	Jaculus_jaculus
MGP_SPRETEiJ_G0034497	Rtl3	100	74.552	ENSMAUG00000011823	Rtl3	100	74.552	Mesocricetus_auratus
MGP_SPRETEiJ_G0034497	Rtl3	100	54.741	ENSMICG00000004901	RTL3	100	55.338	Microcebus_murinus
MGP_SPRETEiJ_G0034497	Rtl3	100	74.153	ENSMOCG00000017247	Rtl3	100	74.153	Microtus_ochrogaster
MGP_SPRETEiJ_G0034497	Rtl3	100	95.841	MGP_CAROLIEiJ_G0033333	Rtl3	100	95.841	Mus_caroli
MGP_SPRETEiJ_G0034497	Rtl3	100	99.458	ENSMUSG00000047686	Rtl3	100	99.458	Mus_musculus
MGP_SPRETEiJ_G0034497	Rtl3	100	93.309	MGP_PahariEiJ_G0031869	Rtl3	100	93.309	Mus_pahari
MGP_SPRETEiJ_G0034497	Rtl3	100	64.076	ENSNGAG00000002851	Rtl3	100	63.558	Nannospalax_galili
MGP_SPRETEiJ_G0034497	Rtl3	100	57.458	ENSOCUG00000025689	RTL3	100	57.288	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0034497	Rtl3	100	55.536	ENSPCOG00000016711	RTL3	100	57.371	Propithecus_coquereli
MGP_SPRETEiJ_G0034497	Rtl3	100	88.129	ENSRNOG00000002429	Rtl3	100	88.129	Rattus_norvegicus
MGP_SPRETEiJ_G0034497	Rtl3	75	54.734	ENSTBEG00000002464	RTL3	88	54.503	Tupaia_belangeri