EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0034539 (Gene tree)
Gene ID
-
Gene Symbol
4921511C20Rik
Alias
LOC245598
Full Name
RIKEN cDNA 4921511C20 gene
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
1606 bases
Position
chrX:106024836-106026441
Accession
2685229
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0096366KH_1PF00013.298.2e-4213
MGP_SPRETEiJ_P0096366KH_1PF00013.298.2e-4223
MGP_SPRETEiJ_P0096366KH_1PF00013.298.2e-4233
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0096366-1606-MGP_SPRETEiJ_P0096366469 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0034539's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0034539's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G00345394921511C20Rik10045.588MGP_SPRETEiJ_G0015260Hdlbp9145.588
MGP_SPRETEiJ_G00345394921511C20Rik9959.701MGP_SPRETEiJ_G0034538Gm3827259.701
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G00345394921511C20Rik10050.512ENSG00000115677HDLBP9952.212Homo_sapiens
MGP_SPRETEiJ_G00345394921511C20Rik10042.526ENSAPOG00000012609hdlbpa9042.647Acanthochromis_polyacanthus
MGP_SPRETEiJ_G00345394921511C20Rik10045.781ENSAMEG00000016552HDLBP8745.781Ailuropoda_melanoleuca
MGP_SPRETEiJ_G00345394921511C20Rik10042.342ENSACIG00000006015hdlbpa9042.342Amphilophus_citrinellus
MGP_SPRETEiJ_G00345394921511C20Rik10042.316ENSAOCG00000000300hdlbpa9042.437Amphiprion_ocellaris
MGP_SPRETEiJ_G00345394921511C20Rik10042.316ENSAPEG00000000522hdlbpa9542.437Amphiprion_percula
MGP_SPRETEiJ_G00345394921511C20Rik10042.227ENSATEG00000009748hdlbpa9042.227Anabas_testudineus
MGP_SPRETEiJ_G00345394921511C20Rik10044.937ENSACAG00000001556HDLBP8744.937Anolis_carolinensis
MGP_SPRETEiJ_G00345394921511C20Rik10046.624ENSANAG00000020545HDLBP8846.624Aotus_nancymaae
MGP_SPRETEiJ_G00345394921511C20Rik10041.474ENSACLG00000025965hdlbpa9041.300Astatotilapia_calliptera
MGP_SPRETEiJ_G00345394921511C20Rik10042.017ENSAMXG00000004221hdlbpa9742.017Astyanax_mexicanus
MGP_SPRETEiJ_G00345394921511C20Rik10046.203ENSBTAG00000004315HDLBP8746.203Bos_taurus
MGP_SPRETEiJ_G00345394921511C20Rik10046.203ENSCJAG00000006152HDLBP8846.203Callithrix_jacchus
MGP_SPRETEiJ_G00345394921511C20Rik10045.992ENSCAFG00000012913HDLBP9445.992Canis_familiaris
MGP_SPRETEiJ_G00345394921511C20Rik10045.992ENSCAFG00020025089HDLBP8745.992Canis_lupus_dingo
MGP_SPRETEiJ_G00345394921511C20Rik10045.781ENSCHIG00000022364HDLBP9145.114Capra_hircus
MGP_SPRETEiJ_G00345394921511C20Rik10045.992ENSTSYG00000002379HDLBP8745.992Carlito_syrichta
MGP_SPRETEiJ_G00345394921511C20Rik10045.551ENSCAPG00000008584HDLBP8945.551Cavia_aperea
MGP_SPRETEiJ_G00345394921511C20Rik10045.551ENSCPOG00000006297HDLBP9145.551Cavia_porcellus
MGP_SPRETEiJ_G00345394921511C20Rik10043.249ENSCCAG00000037920-8743.249Cebus_capucinus
MGP_SPRETEiJ_G00345394921511C20Rik10045.946ENSCCAG00000023361-8845.946Cebus_capucinus
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSCATG00000039363HDLBP8746.835Cercocebus_atys
MGP_SPRETEiJ_G00345394921511C20Rik10045.551ENSCLAG00000002365HDLBP9145.551Chinchilla_lanigera
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSCSAG00000005781HDLBP8646.835Chlorocebus_sabaeus
MGP_SPRETEiJ_G00345394921511C20Rik9738.182ENSCHOG00000003882-5238.182Choloepus_hoffmanni
MGP_SPRETEiJ_G00345394921511C20Rik10041.350ENSCPBG00000002442HDLBP8741.350Chrysemys_picta_bellii
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSCANG00000033571HDLBP8946.835Colobus_angolensis_palliatus
MGP_SPRETEiJ_G00345394921511C20Rik10080.171ENSCGRG000010105704921511C20Rik10080.171Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G00345394921511C20Rik10045.798ENSCGRG00001006086Hdlbp9145.798Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G00345394921511C20Rik10045.798ENSCGRG00000014444Hdlbp8745.798Cricetulus_griseus_crigri
MGP_SPRETEiJ_G00345394921511C20Rik9962.047ENSCGRG00000015720Gm3826962.047Cricetulus_griseus_crigri
MGP_SPRETEiJ_G00345394921511C20Rik10042.105ENSCSEG00000008853hdlbpa9142.105Cynoglossus_semilaevis
MGP_SPRETEiJ_G00345394921511C20Rik10041.139ENSCVAG00000017892hdlbpa9041.139Cyprinodon_variegatus
MGP_SPRETEiJ_G00345394921511C20Rik10040.546ENSDARG00000009830hdlbpa8740.546Danio_rerio
MGP_SPRETEiJ_G00345394921511C20Rik10044.211ENSDNOG00000006753HDLBP8744.211Dasypus_novemcinctus
MGP_SPRETEiJ_G00345394921511C20Rik9847.600ENSETEG00000005416-5747.600Echinops_telfairi
MGP_SPRETEiJ_G00345394921511C20Rik10045.781ENSEASG00005008249HDLBP8745.781Equus_asinus_asinus
MGP_SPRETEiJ_G00345394921511C20Rik9850.000ENSECAG00000030885-7050.000Equus_caballus
MGP_SPRETEiJ_G00345394921511C20Rik10045.781ENSECAG00000012829HDLBP8745.781Equus_caballus
MGP_SPRETEiJ_G00345394921511C20Rik9949.895ENSECAG00000028723-7549.895Equus_caballus
MGP_SPRETEiJ_G00345394921511C20Rik9940.217ENSEEUG00000014648HDLBP7740.217Erinaceus_europaeus
MGP_SPRETEiJ_G00345394921511C20Rik10040.120ENSELUG00000010700hdlbpa9140.120Esox_lucius
MGP_SPRETEiJ_G00345394921511C20Rik10045.992ENSFCAG00000010455HDLBP8745.992Felis_catus
MGP_SPRETEiJ_G00345394921511C20Rik10046.008ENSFALG00000003437HDLBP8746.008Ficedula_albicollis
MGP_SPRETEiJ_G00345394921511C20Rik10045.666ENSFDAG00000000456HDLBP9145.666Fukomys_damarensis
MGP_SPRETEiJ_G00345394921511C20Rik10041.895ENSFHEG00000004848hdlbpa9041.807Fundulus_heteroclitus
MGP_SPRETEiJ_G00345394921511C20Rik10041.632ENSGMOG00000009932hdlbpa9041.632Gadus_morhua
MGP_SPRETEiJ_G00345394921511C20Rik10045.588ENSGALG00000005823HDLBP8746.429Gallus_gallus
MGP_SPRETEiJ_G00345394921511C20Rik10040.717ENSGAFG00000016766hdlbpa8940.717Gambusia_affinis
MGP_SPRETEiJ_G00345394921511C20Rik10040.756ENSGACG00000004648hdlbpa9040.756Gasterosteus_aculeatus
MGP_SPRETEiJ_G00345394921511C20Rik10045.781ENSGAGG00000004256HDLBP8745.781Gopherus_agassizii
MGP_SPRETEiJ_G00345394921511C20Rik10046.624ENSGGOG00000004392HDLBP8846.624Gorilla_gorilla
MGP_SPRETEiJ_G00345394921511C20Rik10041.474ENSHBUG00000001136hdlbpa9041.300Haplochromis_burtoni
MGP_SPRETEiJ_G00345394921511C20Rik10045.455ENSHGLG00000004910HDLBP9145.455Heterocephalus_glaber_female
MGP_SPRETEiJ_G00345394921511C20Rik10045.455ENSHGLG00100013326HDLBP9145.455Heterocephalus_glaber_male
MGP_SPRETEiJ_G00345394921511C20Rik10041.807ENSHCOG00000014837hdlbpa8941.807Hippocampus_comes
MGP_SPRETEiJ_G00345394921511C20Rik10042.380ENSIPUG00000013088hdlbp9042.380Ictalurus_punctatus
MGP_SPRETEiJ_G00345394921511C20Rik7541.948ENSIPUG00000013177-9141.948Ictalurus_punctatus
MGP_SPRETEiJ_G00345394921511C20Rik10045.455ENSSTOG00000013331HDLBP8745.570Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G00345394921511C20Rik10045.992ENSJJAG00000003596Hdlbp9145.992Jaculus_jaculus
MGP_SPRETEiJ_G00345394921511C20Rik9448.984ENSJJAG00000013712-6648.984Jaculus_jaculus
MGP_SPRETEiJ_G00345394921511C20Rik10041.263ENSKMAG00000007571hdlbpa9041.176Kryptolebias_marmoratus
MGP_SPRETEiJ_G00345394921511C20Rik10040.956ENSLBEG00000027461hdlbpa9040.956Labrus_bergylta
MGP_SPRETEiJ_G00345394921511C20Rik10045.053ENSLACG00000003592HDLBP8745.053Latimeria_chalumnae
MGP_SPRETEiJ_G00345394921511C20Rik10041.929ENSLOCG00000006278hdlbpa9041.929Lepisosteus_oculatus
MGP_SPRETEiJ_G00345394921511C20Rik10045.570ENSLAFG00000014826HDLBP8745.570Loxodonta_africana
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSMFAG00000033641HDLBP9146.835Macaca_fascicularis
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSMMUG00000004730HDLBP8946.835Macaca_mulatta
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSMNEG00000024260HDLBP8746.835Macaca_nemestrina
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSMLEG00000042734HDLBP8746.835Mandrillus_leucophaeus
MGP_SPRETEiJ_G00345394921511C20Rik10041.684ENSMAMG00000008611hdlbpa9042.017Mastacembelus_armatus
MGP_SPRETEiJ_G00345394921511C20Rik10041.474ENSMZEG00005009513hdlbpa9041.300Maylandia_zebra
MGP_SPRETEiJ_G00345394921511C20Rik10045.378ENSMGAG00000003686HDLBP9846.218Meleagris_gallopavo
MGP_SPRETEiJ_G00345394921511C20Rik10046.008ENSMAUG00000017743Hdlbp9146.008Mesocricetus_auratus
MGP_SPRETEiJ_G00345394921511C20Rik10044.726ENSMICG00000004569HDLBP8844.726Microcebus_murinus
MGP_SPRETEiJ_G00345394921511C20Rik10046.218ENSMOCG00000006679Hdlbp9146.218Microtus_ochrogaster
MGP_SPRETEiJ_G00345394921511C20Rik9443.571ENSMMOG00000006880hdlbpa8643.571Mola_mola
MGP_SPRETEiJ_G00345394921511C20Rik10044.928ENSMODG00000016033HDLBP8744.928Monodelphis_domestica
MGP_SPRETEiJ_G00345394921511C20Rik10041.962ENSMALG00000015095hdlbpa9041.929Monopterus_albus
MGP_SPRETEiJ_G00345394921511C20Rik10095.309MGP_CAROLIEiJ_G00333744921511C20Rik10095.309Mus_caroli
MGP_SPRETEiJ_G00345394921511C20Rik9959.488MGP_CAROLIEiJ_G0033373Gm3827259.488Mus_caroli
MGP_SPRETEiJ_G00345394921511C20Rik10045.588MGP_CAROLIEiJ_G0014456Hdlbp9145.588Mus_caroli
MGP_SPRETEiJ_G00345394921511C20Rik9959.488ENSMUSG00000062791Gm3827259.488Mus_musculus
MGP_SPRETEiJ_G00345394921511C20Rik10098.507ENSMUSG000000498154921511C20Rik10098.507Mus_musculus
MGP_SPRETEiJ_G00345394921511C20Rik10045.588ENSMUSG00000034088Hdlbp9145.588Mus_musculus
MGP_SPRETEiJ_G00345394921511C20Rik9960.554MGP_PahariEiJ_G0031913Gm3827260.554Mus_pahari
MGP_SPRETEiJ_G00345394921511C20Rik10091.684MGP_PahariEiJ_G00319144921511C20Rik10091.684Mus_pahari
MGP_SPRETEiJ_G00345394921511C20Rik10045.588MGP_PahariEiJ_G0027692Hdlbp9145.588Mus_pahari
MGP_SPRETEiJ_G00345394921511C20Rik10045.570ENSMPUG00000000163HDLBP8745.570Mustela_putorius_furo
MGP_SPRETEiJ_G00345394921511C20Rik10045.455ENSMLUG00000005628HDLBP8745.455Myotis_lucifugus
MGP_SPRETEiJ_G00345394921511C20Rik10045.781ENSNGAG00000014873Hdlbp9145.781Nannospalax_galili
MGP_SPRETEiJ_G00345394921511C20Rik10041.561ENSNBRG00000000051hdlbpa9141.300Neolamprologus_brichardi
MGP_SPRETEiJ_G00345394921511C20Rik9146.324ENSNLEG00000031018-8446.324Nomascus_leucogenys
MGP_SPRETEiJ_G00345394921511C20Rik10047.046ENSNLEG00000013818HDLBP8747.046Nomascus_leucogenys
MGP_SPRETEiJ_G00345394921511C20Rik9940.155ENSMEUG00000008427HDLBP5340.155Notamacropus_eugenii
MGP_SPRETEiJ_G00345394921511C20Rik9945.416ENSOPRG00000011965-8745.416Ochotona_princeps
MGP_SPRETEiJ_G00345394921511C20Rik10045.763ENSODEG00000012313-9145.763Octodon_degus
MGP_SPRETEiJ_G00345394921511C20Rik10044.068ENSODEG00000017391-9044.068Octodon_degus
MGP_SPRETEiJ_G00345394921511C20Rik10041.684ENSONIG00000019272hdlbpa9041.719Oreochromis_niloticus
MGP_SPRETEiJ_G00345394921511C20Rik10046.203ENSOANG00000011759-9046.203Ornithorhynchus_anatinus
MGP_SPRETEiJ_G00345394921511C20Rik10045.243ENSOCUG00000012667HDLBP8745.243Oryctolagus_cuniculus
MGP_SPRETEiJ_G00345394921511C20Rik10041.201ENSORLG00000002226hdlbpa9041.201Oryzias_latipes
MGP_SPRETEiJ_G00345394921511C20Rik10041.408ENSORLG00020007905hdlbpa9041.408Oryzias_latipes_hni
MGP_SPRETEiJ_G00345394921511C20Rik10041.201ENSORLG00015004126hdlbpa9041.201Oryzias_latipes_hsok
MGP_SPRETEiJ_G00345394921511C20Rik10037.292ENSOMEG00000000247hdlbpa9037.500Oryzias_melastigma
MGP_SPRETEiJ_G00345394921511C20Rik10046.624ENSOGAG00000000738HDLBP8746.624Otolemur_garnettii
MGP_SPRETEiJ_G00345394921511C20Rik10044.304ENSOARG00000017870HDLBP8744.304Ovis_aries
MGP_SPRETEiJ_G00345394921511C20Rik10046.414ENSPPAG00000023318HDLBP8846.414Pan_paniscus
MGP_SPRETEiJ_G00345394921511C20Rik10045.992ENSPPRG00000010215HDLBP8745.992Panthera_pardus
MGP_SPRETEiJ_G00345394921511C20Rik10044.351ENSPTIG00000009328HDLBP8944.351Panthera_tigris_altaica
MGP_SPRETEiJ_G00345394921511C20Rik10046.624ENSPTRG00000013121HDLBP8846.624Pan_troglodytes
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSPANG00000011832HDLBP8746.835Papio_anubis
MGP_SPRETEiJ_G00345394921511C20Rik10042.558ENSPKIG00000002392hdlbpa9042.558Paramormyrops_kingsleyae
MGP_SPRETEiJ_G00345394921511C20Rik9148.634ENSPSIG00000010068HDLBP8948.634Pelodiscus_sinensis
MGP_SPRETEiJ_G00345394921511C20Rik10041.841ENSPMGG00000002102hdlbpa9141.841Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G00345394921511C20Rik10046.218ENSPEMG00000017704Hdlbp9146.218Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G00345394921511C20Rik9845.806ENSPCIG00000015375HDLBP8245.806Phascolarctos_cinereus
MGP_SPRETEiJ_G00345394921511C20Rik10041.139ENSPFOG00000000236hdlbpa9041.139Poecilia_formosa
MGP_SPRETEiJ_G00345394921511C20Rik9445.628ENSPLAG00000006033hdlbpa8945.343Poecilia_latipinna
MGP_SPRETEiJ_G00345394921511C20Rik10041.474ENSPMEG00000006627hdlbpa8741.474Poecilia_mexicana
MGP_SPRETEiJ_G00345394921511C20Rik10039.427ENSPREG00000014450hdlbpa8239.427Poecilia_reticulata
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSPPYG00000013351HDLBP8746.835Pongo_abelii
MGP_SPRETEiJ_G00345394921511C20Rik10044.937ENSPCOG00000021622HDLBP9144.937Propithecus_coquereli
MGP_SPRETEiJ_G00345394921511C20Rik10045.243ENSPVAG00000000555HDLBP8745.243Pteropus_vampyrus
MGP_SPRETEiJ_G00345394921511C20Rik10041.474ENSPNYG00000020753hdlbpa9041.300Pundamilia_nyererei
MGP_SPRETEiJ_G00345394921511C20Rik10042.589ENSPNAG00000029610hdlbpa9142.589Pygocentrus_nattereri
MGP_SPRETEiJ_G00345394921511C20Rik10045.588ENSRNOG00000031479Hdlbp8745.588Rattus_norvegicus
MGP_SPRETEiJ_G00345394921511C20Rik9354.670ENSRNOG00000028847AABR07040251.110054.670Rattus_norvegicus
MGP_SPRETEiJ_G00345394921511C20Rik9987.284ENSRNOG00000042823RGD15612306986.994Rattus_norvegicus
MGP_SPRETEiJ_G00345394921511C20Rik9962.047ENSRNOG00000031294RGD15631047262.047Rattus_norvegicus
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSRBIG00000041381HDLBP8946.835Rhinopithecus_bieti
MGP_SPRETEiJ_G00345394921511C20Rik10046.835ENSRROG00000034263HDLBP8946.835Rhinopithecus_roxellana
MGP_SPRETEiJ_G00345394921511C20Rik10043.340ENSSBOG00000033067-8143.340Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G00345394921511C20Rik10046.203ENSSBOG00000029714-8546.203Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G00345394921511C20Rik10047.046ENSSHAG00000012422HDLBP8747.046Sarcophilus_harrisii
MGP_SPRETEiJ_G00345394921511C20Rik10041.597ENSSFOG00015018627hdlbp8741.597Scleropages_formosus
MGP_SPRETEiJ_G00345394921511C20Rik10042.316ENSSMAG00000002382hdlbpa8942.437Scophthalmus_maximus
MGP_SPRETEiJ_G00345394921511C20Rik10042.469ENSSDUG00000022258hdlbpa9042.469Seriola_dumerili
MGP_SPRETEiJ_G00345394921511C20Rik10042.259ENSSLDG00000004437hdlbpa9042.259Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G00345394921511C20Rik10040.678ENSSARG00000012639HDLBP6040.678Sorex_araneus
MGP_SPRETEiJ_G00345394921511C20Rik10046.203ENSSPUG00000009182HDLBP9046.203Sphenodon_punctatus
MGP_SPRETEiJ_G00345394921511C20Rik10042.737ENSSPAG00000009145hdlbpa9042.857Stegastes_partitus
MGP_SPRETEiJ_G00345394921511C20Rik10044.937ENSSSCG00000016379HDLBP9444.937Sus_scrofa
MGP_SPRETEiJ_G00345394921511C20Rik8549.275ENSTGUG00000006189HDLBP8550.362Taeniopygia_guttata
MGP_SPRETEiJ_G00345394921511C20Rik10040.552ENSTRUG00000012148hdlbpa9040.552Takifugu_rubripes
MGP_SPRETEiJ_G00345394921511C20Rik9741.558ENSTNIG00000004185hdlbpa9041.558Tetraodon_nigroviridis
MGP_SPRETEiJ_G00345394921511C20Rik8556.110ENSTBEG00000001860HDLBP6156.110Tupaia_belangeri
MGP_SPRETEiJ_G00345394921511C20Rik9744.949ENSTTRG00000015251HDLBP6344.949Tursiops_truncatus
MGP_SPRETEiJ_G00345394921511C20Rik9948.634ENSUAMG00000018383HDLBP8648.634Ursus_americanus
MGP_SPRETEiJ_G00345394921511C20Rik10046.008ENSUMAG00000010539HDLBP8746.008Ursus_maritimus
MGP_SPRETEiJ_G00345394921511C20Rik8552.985ENSVPAG00000003112HDLBP6952.985Vicugna_pacos
MGP_SPRETEiJ_G00345394921511C20Rik9949.631ENSVVUG00000022797HDLBP8648.907Vulpes_vulpes
MGP_SPRETEiJ_G00345394921511C20Rik10042.316ENSXETG00000012164hdlbp8942.316Xenopus_tropicalis
MGP_SPRETEiJ_G00345394921511C20Rik10040.717ENSXCOG00000005943hdlbpa9040.717Xiphophorus_couchianus
MGP_SPRETEiJ_G00345394921511C20Rik10040.842ENSXMAG00000003787hdlbpa8940.842Xiphophorus_maculatus

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