EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0034567 (Gene tree)
Gene ID: -
Gene Symbol: Zmat1
Alias: B930008K04Rik
Full Name: zinc finger%2C matrin type 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 43109 bases
Position: chrX:113791836-113834944
Accession: 2442284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0096470	zf-met	PF12874.7	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0096469	-	3383	-	MGP_SPRETEiJ_P0096469	614 (aa)	-	-
MGP_SPRETEiJ_T0096471	-	2167	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0096470	-	3506	-	MGP_SPRETEiJ_P0096470	648 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0034567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0034567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0034567	Zmat1	97	60.191	ENSG00000166432	ZMAT1	94	60.191	Homo_sapiens
MGP_SPRETEiJ_G0034567	Zmat1	97	59.936	ENSAMEG00000004976	ZMAT1	100	59.936	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0034567	Zmat1	97	57.962	ENSANAG00000028725	ZMAT1	100	60.331	Aotus_nancymaae
MGP_SPRETEiJ_G0034567	Zmat1	100	54.342	ENSBTAG00000003601	ZMAT1	88	54.130	Bos_taurus
MGP_SPRETEiJ_G0034567	Zmat1	97	57.643	ENSCJAG00000019724	ZMAT1	100	57.643	Callithrix_jacchus
MGP_SPRETEiJ_G0034567	Zmat1	97	59.618	ENSCAFG00000017730	ZMAT1	100	59.618	Canis_familiaris
MGP_SPRETEiJ_G0034567	Zmat1	73	62.395	ENSCAFG00020007319	ZMAT1	100	62.395	Canis_lupus_dingo
MGP_SPRETEiJ_G0034567	Zmat1	73	59.414	ENSCHIG00000010507	ZMAT1	100	59.414	Capra_hircus
MGP_SPRETEiJ_G0034567	Zmat1	96	57.785	ENSTSYG00000007330	ZMAT1	99	57.785	Carlito_syrichta
MGP_SPRETEiJ_G0034567	Zmat1	96	50.639	ENSCPOG00000000581	ZMAT1	99	49.845	Cavia_porcellus
MGP_SPRETEiJ_G0034567	Zmat1	97	59.076	ENSCCAG00000023924	ZMAT1	100	59.076	Cebus_capucinus
MGP_SPRETEiJ_G0034567	Zmat1	100	58.923	ENSCATG00000000551	ZMAT1	100	58.631	Cercocebus_atys
MGP_SPRETEiJ_G0034567	Zmat1	100	48.154	ENSCLAG00000004197	ZMAT1	100	48.154	Chinchilla_lanigera
MGP_SPRETEiJ_G0034567	Zmat1	100	62.366	ENSCSAG00000009795	ZMAT1	90	62.366	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0034567	Zmat1	90	36.680	ENSCPBG00000001356	ZMAT1	96	35.985	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0034567	Zmat1	96	60.129	ENSCANG00000037194	ZMAT1	99	60.129	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0034567	Zmat1	100	77.932	ENSCGRG00001023697	Zmat1	100	77.932	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0034567	Zmat1	97	76.825	ENSCGRG00000001964	Zmat1	99	77.193	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0034567	Zmat1	74	45.010	ENSDNOG00000044924	-	99	44.246	Dasypus_novemcinctus
MGP_SPRETEiJ_G0034567	Zmat1	95	53.950	ENSDNOG00000014852	-	100	53.950	Dasypus_novemcinctus
MGP_SPRETEiJ_G0034567	Zmat1	100	55.162	ENSDORG00000006821	Zmat1	100	55.316	Dipodomys_ordii
MGP_SPRETEiJ_G0034567	Zmat1	96	46.067	ENSETEG00000020259	ZMAT1	99	45.586	Echinops_telfairi
MGP_SPRETEiJ_G0034567	Zmat1	96	56.300	ENSEASG00005014185	ZMAT1	93	56.300	Equus_asinus_asinus
MGP_SPRETEiJ_G0034567	Zmat1	100	60.308	ENSECAG00000013390	ZMAT1	100	62.605	Equus_caballus
MGP_SPRETEiJ_G0034567	Zmat1	96	57.735	ENSFCAG00000023394	ZMAT1	99	57.735	Felis_catus
MGP_SPRETEiJ_G0034567	Zmat1	99	50.619	ENSFDAG00000004063	ZMAT1	96	50.691	Fukomys_damarensis
MGP_SPRETEiJ_G0034567	Zmat1	99	37.452	ENSGAGG00000002326	ZMAT1	100	37.066	Gopherus_agassizii
MGP_SPRETEiJ_G0034567	Zmat1	97	60.032	ENSGGOG00000025784	ZMAT1	94	60.450	Gorilla_gorilla
MGP_SPRETEiJ_G0034567	Zmat1	100	48.923	ENSHGLG00000002494	ZMAT1	100	49.231	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0034567	Zmat1	100	53.385	ENSHGLG00100004968	ZMAT1	100	53.385	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0034567	Zmat1	95	59.308	ENSSTOG00000011140	ZMAT1	100	62.799	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0034567	Zmat1	100	59.168	ENSJJAG00000020188	Zmat1	100	59.168	Jaculus_jaculus
MGP_SPRETEiJ_G0034567	Zmat1	92	49.836	ENSLAFG00000015656	ZMAT1	100	49.671	Loxodonta_africana
MGP_SPRETEiJ_G0034567	Zmat1	93	56.648	ENSMFAG00000042343	ZMAT1	89	56.909	Macaca_fascicularis
MGP_SPRETEiJ_G0034567	Zmat1	100	62.519	ENSMMUG00000002151	ZMAT1	100	62.730	Macaca_mulatta
MGP_SPRETEiJ_G0034567	Zmat1	100	62.058	ENSMNEG00000036310	ZMAT1	96	59.248	Macaca_nemestrina
MGP_SPRETEiJ_G0034567	Zmat1	98	59.184	ENSMLEG00000005031	ZMAT1	96	59.404	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0034567	Zmat1	100	77.469	ENSMAUG00000002941	Zmat1	100	77.469	Mesocricetus_auratus
MGP_SPRETEiJ_G0034567	Zmat1	96	60.606	ENSMICG00000003313	ZMAT1	99	60.606	Microcebus_murinus
MGP_SPRETEiJ_G0034567	Zmat1	100	73.920	ENSMOCG00000000169	Zmat1	100	73.920	Microtus_ochrogaster
MGP_SPRETEiJ_G0034567	Zmat1	100	98.920	ENSMUSG00000052676	Zmat1	100	98.920	Mus_musculus
MGP_SPRETEiJ_G0034567	Zmat1	100	93.827	MGP_PahariEiJ_G0031943	Zmat1	100	93.827	Mus_pahari
MGP_SPRETEiJ_G0034567	Zmat1	96	54.023	ENSMPUG00000002130	ZMAT1	99	51.511	Mustela_putorius_furo
MGP_SPRETEiJ_G0034567	Zmat1	97	53.712	ENSMLUG00000004417	ZMAT1	100	53.081	Myotis_lucifugus
MGP_SPRETEiJ_G0034567	Zmat1	100	70.216	ENSNGAG00000006608	Zmat1	100	70.216	Nannospalax_galili
MGP_SPRETEiJ_G0034567	Zmat1	97	56.529	ENSNLEG00000030520	ZMAT1	94	56.757	Nomascus_leucogenys
MGP_SPRETEiJ_G0034567	Zmat1	64	51.691	ENSOPRG00000009950	-	100	51.691	Ochotona_princeps
MGP_SPRETEiJ_G0034567	Zmat1	85	50.090	ENSOCUG00000004164	ZMAT1	86	49.548	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0034567	Zmat1	97	59.459	ENSOGAG00000033601	ZMAT1	100	59.459	Otolemur_garnettii
MGP_SPRETEiJ_G0034567	Zmat1	96	56.916	ENSOARG00000001897	ZMAT1	99	56.916	Ovis_aries
MGP_SPRETEiJ_G0034567	Zmat1	97	60.191	ENSPPAG00000039554	ZMAT1	95	60.063	Pan_paniscus
MGP_SPRETEiJ_G0034567	Zmat1	96	57.576	ENSPPRG00000005258	ZMAT1	99	57.576	Panthera_pardus
MGP_SPRETEiJ_G0034567	Zmat1	96	57.576	ENSPTIG00000019057	ZMAT1	99	57.576	Panthera_tigris_altaica
MGP_SPRETEiJ_G0034567	Zmat1	100	63.077	ENSPTRG00000041840	ZMAT1	95	60.380	Pan_troglodytes
MGP_SPRETEiJ_G0034567	Zmat1	100	79.969	ENSPEMG00000009944	Zmat1	100	79.969	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0034567	Zmat1	97	57.484	ENSPPYG00000020561	ZMAT1	93	57.711	Pongo_abelii
MGP_SPRETEiJ_G0034567	Zmat1	87	54.918	ENSPCAG00000010283	ZMAT1	94	54.918	Procavia_capensis
MGP_SPRETEiJ_G0034567	Zmat1	95	59.643	ENSPCOG00000021386	ZMAT1	98	59.643	Propithecus_coquereli
MGP_SPRETEiJ_G0034567	Zmat1	96	57.987	ENSPVAG00000013206	ZMAT1	99	57.987	Pteropus_vampyrus
MGP_SPRETEiJ_G0034567	Zmat1	100	84.877	ENSRNOG00000024135	Zmat1	100	84.877	Rattus_norvegicus
MGP_SPRETEiJ_G0034567	Zmat1	95	60.098	ENSRBIG00000034121	ZMAT1	94	60.325	Rhinopithecus_bieti
MGP_SPRETEiJ_G0034567	Zmat1	96	59.807	ENSRROG00000036747	ZMAT1	93	60.032	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0034567	Zmat1	97	58.439	ENSSBOG00000029970	ZMAT1	100	60.826	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0034567	Zmat1	95	40.698	ENSSHAG00000011087	-	100	41.085	Sarcophilus_harrisii
MGP_SPRETEiJ_G0034567	Zmat1	61	47.685	ENSSARG00000003063	-	62	48.148	Sorex_araneus
MGP_SPRETEiJ_G0034567	Zmat1	75	33.229	ENSSPUG00000004951	ZMAT1	92	32.707	Sphenodon_punctatus
MGP_SPRETEiJ_G0034567	Zmat1	96	60.737	ENSSSCG00000012512	ZMAT1	100	62.605	Sus_scrofa
MGP_SPRETEiJ_G0034567	Zmat1	91	57.504	ENSTBEG00000012967	ZMAT1	100	57.504	Tupaia_belangeri
MGP_SPRETEiJ_G0034567	Zmat1	96	59.330	ENSTTRG00000016662	ZMAT1	99	58.692	Tursiops_truncatus
MGP_SPRETEiJ_G0034567	Zmat1	73	62.815	ENSUAMG00000015209	ZMAT1	100	62.815	Ursus_americanus
MGP_SPRETEiJ_G0034567	Zmat1	73	62.815	ENSUMAG00000000627	ZMAT1	100	62.815	Ursus_maritimus
MGP_SPRETEiJ_G0034567	Zmat1	96	60.606	ENSVPAG00000006267	ZMAT1	99	60.606	Vicugna_pacos
MGP_SPRETEiJ_G0034567	Zmat1	100	61.905	ENSVVUG00000005342	ZMAT1	90	61.905	Vulpes_vulpes