EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0034617 (Gene tree)
Gene ID: -
Gene Symbol: Rbm41
Alias: D330023I21Rik
Full Name: RNA binding motif protein 41
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 106153 bases
Position: chrX:118780038-118886190
Accession: 2444923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0096603	RRM_1	PF00076.22	3.1e-08	1	1
MGP_SPRETEiJ_P0096605	RRM_1	PF00076.22	3.8e-08	1	1
MGP_SPRETEiJ_P0096604	RRM_1	PF00076.22	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0096608	-	1696	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0096604	-	3677	-	MGP_SPRETEiJ_P0096604	425 (aa)	-	-
MGP_SPRETEiJ_T0096605	-	2784	-	MGP_SPRETEiJ_P0096605	413 (aa)	-	-
MGP_SPRETEiJ_T0096606	-	1307	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0096607	-	726	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0096602	-	2224	-	MGP_SPRETEiJ_P0096602	404 (aa)	-	-
MGP_SPRETEiJ_T0096603	-	3724	-	MGP_SPRETEiJ_P0096603	437 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0034617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0034617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0034617	Rbm41	100	87.651	ENSG00000089682	RBM41	98	93.467	Homo_sapiens
MGP_SPRETEiJ_G0034617	Rbm41	99	87.591	ENSAMEG00000010490	RBM41	99	87.591	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0034617	Rbm41	93	41.412	ENSACIG00000014038	rbm41	96	40.835	Amphilophus_citrinellus
MGP_SPRETEiJ_G0034617	Rbm41	92	41.026	ENSAOCG00000020927	rbm41	94	39.948	Amphiprion_ocellaris
MGP_SPRETEiJ_G0034617	Rbm41	92	41.026	ENSAPEG00000001223	rbm41	93	40.897	Amphiprion_percula
MGP_SPRETEiJ_G0034617	Rbm41	91	40.052	ENSATEG00000022968	rbm41	97	37.442	Anabas_testudineus
MGP_SPRETEiJ_G0034617	Rbm41	87	42.268	ENSACAG00000014146	RBM41	80	44.809	Anolis_carolinensis
MGP_SPRETEiJ_G0034617	Rbm41	100	87.185	ENSANAG00000037624	RBM41	100	87.185	Aotus_nancymaae
MGP_SPRETEiJ_G0034617	Rbm41	94	39.443	ENSACLG00000024125	rbm41	97	39.080	Astatotilapia_calliptera
MGP_SPRETEiJ_G0034617	Rbm41	94	40.835	ENSAMXG00000007109	rbm41	93	40.835	Astyanax_mexicanus
MGP_SPRETEiJ_G0034617	Rbm41	100	87.643	ENSBTAG00000000955	RBM41	100	87.643	Bos_taurus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.041	ENSCJAG00000007957	RBM41	100	86.041	Callithrix_jacchus
MGP_SPRETEiJ_G0034617	Rbm41	99	87.105	ENSCAFG00000017959	RBM41	99	87.105	Canis_familiaris
MGP_SPRETEiJ_G0034617	Rbm41	99	87.471	ENSCAFG00020006764	RBM41	98	87.471	Canis_lupus_dingo
MGP_SPRETEiJ_G0034617	Rbm41	100	86.925	ENSCHIG00000015945	RBM41	100	86.925	Capra_hircus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.925	ENSTSYG00000006980	RBM41	100	86.925	Carlito_syrichta
MGP_SPRETEiJ_G0034617	Rbm41	100	84.897	ENSCPOG00000025052	RBM41	100	84.897	Cavia_porcellus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.683	ENSCCAG00000028014	RBM41	100	86.683	Cebus_capucinus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.925	ENSCATG00000020042	RBM41	100	86.925	Cercocebus_atys
MGP_SPRETEiJ_G0034617	Rbm41	100	84.897	ENSCLAG00000002330	RBM41	100	84.897	Chinchilla_lanigera
MGP_SPRETEiJ_G0034617	Rbm41	98	88.525	ENSCSAG00000009146	RBM41	93	88.525	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0034617	Rbm41	94	60.050	ENSCPBG00000001728	RBM41	98	59.080	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0034617	Rbm41	99	86.765	ENSCANG00000028836	RBM41	100	86.765	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0034617	Rbm41	100	90.847	ENSCGRG00001012295	Rbm41	100	90.847	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0034617	Rbm41	100	89.931	ENSCGRG00000010545	Rbm41	100	89.931	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0034617	Rbm41	94	39.857	ENSCSEG00000010491	rbm41	97	39.857	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0034617	Rbm41	96	41.667	ENSDARG00000054096	rbm41	99	41.905	Danio_rerio
MGP_SPRETEiJ_G0034617	Rbm41	99	86.375	ENSDNOG00000013865	RBM41	99	86.375	Dasypus_novemcinctus
MGP_SPRETEiJ_G0034617	Rbm41	98	83.916	ENSDORG00000008077	Rbm41	99	83.916	Dipodomys_ordii
MGP_SPRETEiJ_G0034617	Rbm41	68	92.683	ENSETEG00000019681	-	68	92.683	Echinops_telfairi
MGP_SPRETEiJ_G0034617	Rbm41	100	87.893	ENSECAG00000021846	RBM41	100	87.893	Equus_caballus
MGP_SPRETEiJ_G0034617	Rbm41	99	82.439	ENSEEUG00000006722	RBM41	100	82.439	Erinaceus_europaeus
MGP_SPRETEiJ_G0034617	Rbm41	96	38.095	ENSELUG00000007426	rbm41	93	38.095	Esox_lucius
MGP_SPRETEiJ_G0034617	Rbm41	99	85.888	ENSFCAG00000001982	RBM41	85	85.888	Felis_catus
MGP_SPRETEiJ_G0034617	Rbm41	97	54.902	ENSFALG00000011221	RBM41	95	54.902	Ficedula_albicollis
MGP_SPRETEiJ_G0034617	Rbm41	100	86.041	ENSFDAG00000020264	RBM41	100	86.041	Fukomys_damarensis
MGP_SPRETEiJ_G0034617	Rbm41	84	40.169	ENSFHEG00000006026	rbm41	91	40.169	Fundulus_heteroclitus
MGP_SPRETEiJ_G0034617	Rbm41	96	37.965	ENSGMOG00000005876	rbm41	99	37.965	Gadus_morhua
MGP_SPRETEiJ_G0034617	Rbm41	94	55.013	ENSGALG00000004832	RBM41	98	53.713	Gallus_gallus
MGP_SPRETEiJ_G0034617	Rbm41	95	38.995	ENSGAFG00000011066	rbm41	92	39.474	Gambusia_affinis
MGP_SPRETEiJ_G0034617	Rbm41	94	40.000	ENSGACG00000020842	rbm41	95	40.000	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0034617	Rbm41	94	58.734	ENSGAGG00000015064	RBM41	99	58.252	Gopherus_agassizii
MGP_SPRETEiJ_G0034617	Rbm41	100	87.651	ENSGGOG00000006587	RBM41	100	87.651	Gorilla_gorilla
MGP_SPRETEiJ_G0034617	Rbm41	94	38.979	ENSHBUG00000014307	rbm41	97	39.310	Haplochromis_burtoni
MGP_SPRETEiJ_G0034617	Rbm41	98	87.646	ENSHGLG00000003803	RBM41	94	87.646	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0034617	Rbm41	98	87.646	ENSHGLG00100007396	RBM41	98	86.783	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0034617	Rbm41	94	35.294	ENSHCOG00000009614	rbm41	96	34.761	Hippocampus_comes
MGP_SPRETEiJ_G0034617	Rbm41	97	38.584	ENSIPUG00000007379	rbm41	90	38.657	Ictalurus_punctatus
MGP_SPRETEiJ_G0034617	Rbm41	96	89.311	ENSSTOG00000001604	RBM41	100	87.872	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.728	ENSJJAG00000010415	Rbm41	100	86.728	Jaculus_jaculus
MGP_SPRETEiJ_G0034617	Rbm41	93	40.528	ENSKMAG00000013436	rbm41	99	39.908	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0034617	Rbm41	95	48.227	ENSLACG00000012336	RBM41	100	48.951	Latimeria_chalumnae
MGP_SPRETEiJ_G0034617	Rbm41	61	58.140	ENSLOCG00000014958	rbm41	77	58.140	Lepisosteus_oculatus
MGP_SPRETEiJ_G0034617	Rbm41	99	86.667	ENSLAFG00000028266	RBM41	99	86.667	Loxodonta_africana
MGP_SPRETEiJ_G0034617	Rbm41	99	87.010	ENSMFAG00000041338	RBM41	100	87.010	Macaca_fascicularis
MGP_SPRETEiJ_G0034617	Rbm41	98	88.525	ENSMMUG00000023172	RBM41	98	86.849	Macaca_mulatta
MGP_SPRETEiJ_G0034617	Rbm41	100	86.683	ENSMNEG00000009942	RBM41	100	86.683	Macaca_nemestrina
MGP_SPRETEiJ_G0034617	Rbm41	99	86.520	ENSMLEG00000030890	RBM41	100	86.520	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0034617	Rbm41	95	39.408	ENSMAMG00000000581	rbm41	97	39.408	Mastacembelus_armatus
MGP_SPRETEiJ_G0034617	Rbm41	91	39.952	ENSMZEG00005011676	rbm41	94	39.573	Maylandia_zebra
MGP_SPRETEiJ_G0034617	Rbm41	68	54.093	ENSMGAG00000009663	RBM41	99	51.987	Meleagris_gallopavo
MGP_SPRETEiJ_G0034617	Rbm41	100	91.076	ENSMAUG00000016409	Rbm41	100	91.076	Mesocricetus_auratus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.041	ENSMICG00000009750	RBM41	100	86.041	Microcebus_murinus
MGP_SPRETEiJ_G0034617	Rbm41	100	91.991	ENSMOCG00000008323	Rbm41	100	91.991	Microtus_ochrogaster
MGP_SPRETEiJ_G0034617	Rbm41	93	42.928	ENSMMOG00000014574	rbm41	96	43.411	Mola_mola
MGP_SPRETEiJ_G0034617	Rbm41	100	61.928	ENSMODG00000002312	RBM41	100	61.928	Monodelphis_domestica
MGP_SPRETEiJ_G0034617	Rbm41	93	40.471	ENSMALG00000010729	rbm41	97	39.907	Monopterus_albus
MGP_SPRETEiJ_G0034617	Rbm41	100	97.579	MGP_CAROLIEiJ_G0033447	Rbm41	100	97.579	Mus_caroli
MGP_SPRETEiJ_G0034617	Rbm41	100	99.542	ENSMUSG00000031433	Rbm41	100	99.542	Mus_musculus
MGP_SPRETEiJ_G0034617	Rbm41	100	97.254	MGP_PahariEiJ_G0031986	Rbm41	100	97.254	Mus_pahari
MGP_SPRETEiJ_G0034617	Rbm41	99	87.835	ENSMPUG00000003751	RBM41	85	87.835	Mustela_putorius_furo
MGP_SPRETEiJ_G0034617	Rbm41	99	86.375	ENSMLUG00000005943	RBM41	99	86.375	Myotis_lucifugus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.728	ENSNGAG00000014004	Rbm41	100	86.728	Nannospalax_galili
MGP_SPRETEiJ_G0034617	Rbm41	90	42.239	ENSNBRG00000014480	rbm41	94	41.604	Neolamprologus_brichardi
MGP_SPRETEiJ_G0034617	Rbm41	100	87.409	ENSNLEG00000013861	RBM41	100	87.409	Nomascus_leucogenys
MGP_SPRETEiJ_G0034617	Rbm41	99	63.107	ENSMEUG00000002663	RBM41	100	63.107	Notamacropus_eugenii
MGP_SPRETEiJ_G0034617	Rbm41	100	85.126	ENSODEG00000010074	RBM41	100	85.126	Octodon_degus
MGP_SPRETEiJ_G0034617	Rbm41	94	41.832	ENSONIG00000013260	rbm41	100	41.832	Oreochromis_niloticus
MGP_SPRETEiJ_G0034617	Rbm41	99	85.747	ENSOCUG00000015937	RBM41	99	85.747	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0034617	Rbm41	95	39.671	ENSORLG00000015367	rbm41	99	39.671	Oryzias_latipes
MGP_SPRETEiJ_G0034617	Rbm41	79	49.519	ENSORLG00020008056	rbm41	72	49.519	Oryzias_latipes_hni
MGP_SPRETEiJ_G0034617	Rbm41	95	42.752	ENSORLG00015014350	rbm41	99	42.543	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0034617	Rbm41	94	39.372	ENSOMEG00000023816	rbm41	98	38.810	Oryzias_melastigma
MGP_SPRETEiJ_G0034617	Rbm41	99	85.401	ENSOGAG00000009280	RBM41	99	85.401	Otolemur_garnettii
MGP_SPRETEiJ_G0034617	Rbm41	99	86.618	ENSOARG00000018817	RBM41	94	86.618	Ovis_aries
MGP_SPRETEiJ_G0034617	Rbm41	100	87.651	ENSPPAG00000000213	RBM41	100	87.651	Pan_paniscus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.925	ENSPPRG00000021500	RBM41	100	86.925	Panthera_pardus
MGP_SPRETEiJ_G0034617	Rbm41	98	89.227	ENSPTRG00000022158	RBM41	99	88.586	Pan_troglodytes
MGP_SPRETEiJ_G0034617	Rbm41	100	87.167	ENSPANG00000012935	RBM41	100	87.167	Papio_anubis
MGP_SPRETEiJ_G0034617	Rbm41	95	41.514	ENSPKIG00000008793	rbm41	99	41.514	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0034617	Rbm41	58	53.527	ENSPSIG00000003931	RBM41	97	52.734	Pelodiscus_sinensis
MGP_SPRETEiJ_G0034617	Rbm41	100	91.304	ENSPEMG00000015991	Rbm41	100	91.304	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0034617	Rbm41	96	64.899	ENSPCIG00000007079	RBM41	100	64.899	Phascolarctos_cinereus
MGP_SPRETEiJ_G0034617	Rbm41	75	45.082	ENSPFOG00000000848	rbm41	94	38.889	Poecilia_formosa
MGP_SPRETEiJ_G0034617	Rbm41	67	45.082	ENSPLAG00000022761	rbm41	87	37.634	Poecilia_latipinna
MGP_SPRETEiJ_G0034617	Rbm41	93	39.756	ENSPMEG00000002394	rbm41	94	39.277	Poecilia_mexicana
MGP_SPRETEiJ_G0034617	Rbm41	93	39.467	ENSPREG00000013759	rbm41	93	38.995	Poecilia_reticulata
MGP_SPRETEiJ_G0034617	Rbm41	100	87.409	ENSPPYG00000020609	RBM41	100	87.409	Pongo_abelii
MGP_SPRETEiJ_G0034617	Rbm41	100	85.472	ENSPCAG00000003991	RBM41	100	85.472	Procavia_capensis
MGP_SPRETEiJ_G0034617	Rbm41	100	86.441	ENSPCOG00000014296	RBM41	100	86.441	Propithecus_coquereli
MGP_SPRETEiJ_G0034617	Rbm41	68	89.796	ENSPVAG00000001786	-	68	89.796	Pteropus_vampyrus
MGP_SPRETEiJ_G0034617	Rbm41	90	42.597	ENSPNYG00000012687	rbm41	94	42.092	Pundamilia_nyererei
MGP_SPRETEiJ_G0034617	Rbm41	95	41.096	ENSPNAG00000003395	rbm41	96	41.096	Pygocentrus_nattereri
MGP_SPRETEiJ_G0034617	Rbm41	100	94.431	ENSRNOG00000057622	Rbm41	100	94.431	Rattus_norvegicus
MGP_SPRETEiJ_G0034617	Rbm41	99	86.893	ENSRBIG00000030599	RBM41	99	87.841	Rhinopithecus_bieti
MGP_SPRETEiJ_G0034617	Rbm41	99	86.893	ENSRROG00000009201	RBM41	99	87.841	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0034617	Rbm41	100	86.925	ENSSBOG00000030042	RBM41	100	86.925	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0034617	Rbm41	99	64.649	ENSSHAG00000002285	RBM41	100	64.649	Sarcophilus_harrisii
MGP_SPRETEiJ_G0034617	Rbm41	95	40.596	ENSSFOG00015009956	rbm41	95	40.878	Scleropages_formosus
MGP_SPRETEiJ_G0034617	Rbm41	93	42.651	ENSSMAG00000014485	rbm41	99	42.381	Scophthalmus_maximus
MGP_SPRETEiJ_G0034617	Rbm41	94	40.793	ENSSDUG00000008808	rbm41	97	40.793	Seriola_dumerili
MGP_SPRETEiJ_G0034617	Rbm41	93	41.509	ENSSLDG00000002232	rbm41	97	40.930	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0034617	Rbm41	100	84.262	ENSSARG00000004377	RBM41	100	84.262	Sorex_araneus
MGP_SPRETEiJ_G0034617	Rbm41	96	54.271	ENSSPUG00000018486	RBM41	98	54.271	Sphenodon_punctatus
MGP_SPRETEiJ_G0034617	Rbm41	94	40.845	ENSSPAG00000018885	rbm41	97	40.888	Stegastes_partitus
MGP_SPRETEiJ_G0034617	Rbm41	100	88.101	ENSSSCG00000012556	RBM41	100	88.101	Sus_scrofa
MGP_SPRETEiJ_G0034617	Rbm41	68	54.225	ENSTGUG00000006473	-	97	53.020	Taeniopygia_guttata
MGP_SPRETEiJ_G0034617	Rbm41	95	40.288	ENSTRUG00000009805	rbm41	99	40.288	Takifugu_rubripes
MGP_SPRETEiJ_G0034617	Rbm41	95	40.943	ENSTNIG00000004692	rbm41	96	40.943	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0034617	Rbm41	99	88.631	ENSUAMG00000021897	RBM41	98	88.631	Ursus_americanus
MGP_SPRETEiJ_G0034617	Rbm41	100	86.925	ENSVPAG00000003647	RBM41	100	86.925	Vicugna_pacos
MGP_SPRETEiJ_G0034617	Rbm41	99	86.861	ENSVVUG00000009707	RBM41	85	86.861	Vulpes_vulpes
MGP_SPRETEiJ_G0034617	Rbm41	76	47.009	ENSXCOG00000018744	rbm41	94	38.554	Xiphophorus_couchianus
MGP_SPRETEiJ_G0034617	Rbm41	93	39.563	ENSXMAG00000015338	rbm41	94	39.089	Xiphophorus_maculatus