EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0034654 (Gene tree)
Gene ID: -
Gene Symbol: Apex2
Alias: Ape2|C430040P13Rik
Full Name: apurinic/apyrimidinic endonuclease 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 66229 bases
Position: chrX:128368368-128434596
Accession: 1924872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0096747	Exo_endo_phos	PF03372.23	1.7e-17	1	1
MGP_SPRETEiJ_P0096751	Exo_endo_phos	PF03372.23	1.7e-17	1	1
MGP_SPRETEiJ_P0096750	Exo_endo_phos	PF03372.23	5.4e-16	1	1
MGP_SPRETEiJ_P0096754	Exo_endo_phos	PF03372.23	1.9e-13	1	1
MGP_SPRETEiJ_P0096741	Exo_endo_phos	PF03372.23	2.2e-13	1	1
MGP_SPRETEiJ_P0096742	Exo_endo_phos	PF03372.23	2.3e-13	1	1
MGP_SPRETEiJ_P0096753	Exo_endo_phos	PF03372.23	7.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0096749	-	363	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0096748	-	2598	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0096751	-	1884	-	MGP_SPRETEiJ_P0096751	516 (aa)	-	-
MGP_SPRETEiJ_T0096741	-	3622	-	MGP_SPRETEiJ_P0096741	260 (aa)	-	-
MGP_SPRETEiJ_T0096753	-	795	-	MGP_SPRETEiJ_P0096753	264 (aa)	-	-
MGP_SPRETEiJ_T0096750	-	1852	-	MGP_SPRETEiJ_P0096750	523 (aa)	-	-
MGP_SPRETEiJ_T0096742	-	1654	-	MGP_SPRETEiJ_P0096742	261 (aa)	-	-
MGP_SPRETEiJ_T0096747	-	4736	-	MGP_SPRETEiJ_P0096747	516 (aa)	-	-
MGP_SPRETEiJ_T0096752	-	784	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0096754	-	968	-	MGP_SPRETEiJ_P0096754	246 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0034654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0034654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0034654	Apex2	100	81.132	ENSG00000169188	APEX2	100	79.537	Homo_sapiens
MGP_SPRETEiJ_G0034654	Apex2	100	52.817	ENSAPOG00000005805	apex2	99	46.221	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0034654	Apex2	100	80.377	ENSAMEG00000003608	APEX2	100	77.950	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0034654	Apex2	98	53.650	ENSACIG00000010000	apex2	99	45.629	Amphilophus_citrinellus
MGP_SPRETEiJ_G0034654	Apex2	100	52.817	ENSAOCG00000021774	apex2	99	46.749	Amphiprion_ocellaris
MGP_SPRETEiJ_G0034654	Apex2	100	52.817	ENSAPEG00000020890	apex2	93	46.573	Amphiprion_percula
MGP_SPRETEiJ_G0034654	Apex2	100	52.669	ENSATEG00000023600	apex2	99	45.611	Anabas_testudineus
MGP_SPRETEiJ_G0034654	Apex2	100	58.712	ENSACAG00000011201	APEX2	99	52.132	Anolis_carolinensis
MGP_SPRETEiJ_G0034654	Apex2	100	73.585	ENSANAG00000020845	-	100	69.522	Aotus_nancymaae
MGP_SPRETEiJ_G0034654	Apex2	100	80.000	ENSANAG00000021907	-	100	78.764	Aotus_nancymaae
MGP_SPRETEiJ_G0034654	Apex2	98	51.625	ENSAMXG00000007422	apex2	99	44.718	Astyanax_mexicanus
MGP_SPRETEiJ_G0034654	Apex2	100	81.132	ENSBTAG00000013177	APEX2	100	79.691	Bos_taurus
MGP_SPRETEiJ_G0034654	Apex2	100	80.755	ENSCJAG00000016584	APEX2	100	79.344	Callithrix_jacchus
MGP_SPRETEiJ_G0034654	Apex2	100	78.113	ENSCAFG00000014310	APEX2	100	77.027	Canis_familiaris
MGP_SPRETEiJ_G0034654	Apex2	100	80.377	ENSCAFG00020013818	APEX2	100	78.378	Canis_lupus_dingo
MGP_SPRETEiJ_G0034654	Apex2	100	80.377	ENSCHIG00000019916	APEX2	100	79.304	Capra_hircus
MGP_SPRETEiJ_G0034654	Apex2	100	81.887	ENSTSYG00000005612	APEX2	100	79.383	Carlito_syrichta
MGP_SPRETEiJ_G0034654	Apex2	100	75.094	ENSCPOG00000007265	APEX2	100	73.501	Cavia_porcellus
MGP_SPRETEiJ_G0034654	Apex2	94	73.092	ENSCCAG00000025405	-	99	66.600	Cebus_capucinus
MGP_SPRETEiJ_G0034654	Apex2	100	79.245	ENSCATG00000044854	APEX2	100	78.571	Cercocebus_atys
MGP_SPRETEiJ_G0034654	Apex2	100	78.113	ENSCLAG00000017315	APEX2	100	76.062	Chinchilla_lanigera
MGP_SPRETEiJ_G0034654	Apex2	100	79.245	ENSCSAG00000012124	APEX2	100	78.764	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0034654	Apex2	100	54.135	ENSCPBG00000016631	APEX2	99	48.062	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0034654	Apex2	99	45.552	ENSCSAVG00000006052	-	99	39.775	Ciona_savignyi
MGP_SPRETEiJ_G0034654	Apex2	100	78.868	ENSCANG00000003053	APEX2	100	78.571	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0034654	Apex2	100	88.781	ENSCGRG00001008132	Apex2	100	88.781	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0034654	Apex2	100	88.781	ENSCGRG00000009667	Apex2	100	88.781	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0034654	Apex2	100	53.986	ENSCSEG00000019900	apex2	98	46.341	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0034654	Apex2	100	51.971	ENSCVAG00000021583	apex2	99	44.655	Cyprinodon_variegatus
MGP_SPRETEiJ_G0034654	Apex2	100	53.763	ENSDARG00000008472	apex2	99	45.694	Danio_rerio
MGP_SPRETEiJ_G0034654	Apex2	100	78.113	ENSDNOG00000038901	APEX2	100	76.062	Dasypus_novemcinctus
MGP_SPRETEiJ_G0034654	Apex2	94	83.983	ENSDORG00000024412	-	99	83.983	Dipodomys_ordii
MGP_SPRETEiJ_G0034654	Apex2	99	49.064	ENSEBUG00000015654	apex2	99	44.788	Eptatretus_burgeri
MGP_SPRETEiJ_G0034654	Apex2	100	81.509	ENSEASG00005011694	APEX2	91	79.730	Equus_asinus_asinus
MGP_SPRETEiJ_G0034654	Apex2	100	81.509	ENSECAG00000026921	APEX2	91	79.730	Equus_caballus
MGP_SPRETEiJ_G0034654	Apex2	100	76.604	ENSEEUG00000013172	APEX2	100	72.201	Erinaceus_europaeus
MGP_SPRETEiJ_G0034654	Apex2	100	53.004	ENSELUG00000021417	apex2	99	43.973	Esox_lucius
MGP_SPRETEiJ_G0034654	Apex2	100	78.491	ENSFCAG00000021990	APEX2	100	75.676	Felis_catus
MGP_SPRETEiJ_G0034654	Apex2	100	78.868	ENSFDAG00000008076	APEX2	94	84.234	Fukomys_damarensis
MGP_SPRETEiJ_G0034654	Apex2	100	41.637	ENSFHEG00000021411	apex2	99	42.349	Fundulus_heteroclitus
MGP_SPRETEiJ_G0034654	Apex2	81	55.500	ENSGMOG00000019681	apex2	89	55.500	Gadus_morhua
MGP_SPRETEiJ_G0034654	Apex2	100	50.903	ENSGAFG00000005829	apex2	99	45.026	Gambusia_affinis
MGP_SPRETEiJ_G0034654	Apex2	76	61.702	ENSGACG00000012307	apex2	97	51.154	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0034654	Apex2	86	47.323	ENSGAGG00000011520	APEX2	85	47.712	Gopherus_agassizii
MGP_SPRETEiJ_G0034654	Apex2	100	80.755	ENSGGOG00000002056	APEX2	100	79.344	Gorilla_gorilla
MGP_SPRETEiJ_G0034654	Apex2	100	53.405	ENSHBUG00000009938	apex2	99	46.972	Haplochromis_burtoni
MGP_SPRETEiJ_G0034654	Apex2	100	77.736	ENSHGLG00000000273	APEX2	99	78.049	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0034654	Apex2	86	82.629	ENSHGLG00100006734	-	100	82.629	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0034654	Apex2	84	63.285	ENSHCOG00000018521	-	100	63.285	Hippocampus_comes
MGP_SPRETEiJ_G0034654	Apex2	100	55.431	ENSHCOG00000010165	apex2	99	47.761	Hippocampus_comes
MGP_SPRETEiJ_G0034654	Apex2	100	52.878	ENSIPUG00000000352	APEX2	99	44.670	Ictalurus_punctatus
MGP_SPRETEiJ_G0034654	Apex2	100	83.396	ENSSTOG00000025121	APEX2	99	83.673	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0034654	Apex2	100	82.197	ENSJJAG00000019611	Apex2	100	81.625	Jaculus_jaculus
MGP_SPRETEiJ_G0034654	Apex2	100	56.364	ENSKMAG00000006985	apex2	99	49.198	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0034654	Apex2	100	52.669	ENSLBEG00000012139	apex2	99	46.274	Labrus_bergylta
MGP_SPRETEiJ_G0034654	Apex2	99	43.816	ENSLACG00000000865	APEX2	99	43.816	Latimeria_chalumnae
MGP_SPRETEiJ_G0034654	Apex2	100	53.521	ENSLOCG00000014467	apex2	99	46.127	Lepisosteus_oculatus
MGP_SPRETEiJ_G0034654	Apex2	100	80.377	ENSLAFG00000018312	APEX2	100	77.413	Loxodonta_africana
MGP_SPRETEiJ_G0034654	Apex2	100	79.623	ENSMFAG00000002486	APEX2	100	78.764	Macaca_fascicularis
MGP_SPRETEiJ_G0034654	Apex2	100	79.623	ENSMMUG00000008428	APEX2	100	78.378	Macaca_mulatta
MGP_SPRETEiJ_G0034654	Apex2	100	79.623	ENSMNEG00000036783	APEX2	100	78.764	Macaca_nemestrina
MGP_SPRETEiJ_G0034654	Apex2	100	79.245	ENSMLEG00000028208	APEX2	100	78.571	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0034654	Apex2	100	51.429	ENSMAMG00000024220	apex2	99	43.367	Mastacembelus_armatus
MGP_SPRETEiJ_G0034654	Apex2	100	53.405	ENSMZEG00005026322	apex2	99	46.972	Maylandia_zebra
MGP_SPRETEiJ_G0034654	Apex2	76	94.681	ENSMAUG00000016924	-	100	94.681	Mesocricetus_auratus
MGP_SPRETEiJ_G0034654	Apex2	100	75.676	ENSMICG00000043181	APEX2	100	75.676	Microcebus_murinus
MGP_SPRETEiJ_G0034654	Apex2	100	87.879	ENSMOCG00000004339	Apex2	100	88.588	Microtus_ochrogaster
MGP_SPRETEiJ_G0034654	Apex2	100	54.286	ENSMMOG00000017340	apex2	99	44.750	Mola_mola
MGP_SPRETEiJ_G0034654	Apex2	98	63.707	ENSMODG00000005341	APEX2	99	56.226	Monodelphis_domestica
MGP_SPRETEiJ_G0034654	Apex2	100	50.178	ENSMALG00000014179	apex2	99	43.993	Monopterus_albus
MGP_SPRETEiJ_G0034654	Apex2	100	100.000	MGP_CAROLIEiJ_G0033484	Apex2	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0034654	Apex2	100	99.621	ENSMUSG00000025269	Apex2	100	99.235	Mus_musculus
MGP_SPRETEiJ_G0034654	Apex2	100	98.485	MGP_PahariEiJ_G0032023	Apex2	100	98.485	Mus_pahari
MGP_SPRETEiJ_G0034654	Apex2	100	79.245	ENSMPUG00000003293	APEX2	100	77.369	Mustela_putorius_furo
MGP_SPRETEiJ_G0034654	Apex2	100	76.226	ENSMLUG00000004562	-	100	72.587	Myotis_lucifugus
MGP_SPRETEiJ_G0034654	Apex2	100	77.736	ENSMLUG00000016298	-	100	74.517	Myotis_lucifugus
MGP_SPRETEiJ_G0034654	Apex2	100	83.712	ENSNGAG00000013576	Apex2	100	82.398	Nannospalax_galili
MGP_SPRETEiJ_G0034654	Apex2	100	53.405	ENSNBRG00000010099	apex2	99	45.486	Neolamprologus_brichardi
MGP_SPRETEiJ_G0034654	Apex2	98	80.843	ENSNLEG00000032067	-	100	81.955	Nomascus_leucogenys
MGP_SPRETEiJ_G0034654	Apex2	86	83.568	ENSODEG00000003095	-	100	83.568	Octodon_degus
MGP_SPRETEiJ_G0034654	Apex2	100	55.849	ENSONIG00000016881	apex2	99	49.248	Oreochromis_niloticus
MGP_SPRETEiJ_G0034654	Apex2	78	66.977	ENSOANG00000000689	-	95	52.784	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0034654	Apex2	86	85.446	ENSOCUG00000000570	APEX2	100	65.840	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0034654	Apex2	100	53.285	ENSORLG00000014053	apex2	99	47.500	Oryzias_latipes
MGP_SPRETEiJ_G0034654	Apex2	100	52.190	ENSORLG00020013253	apex2	99	46.786	Oryzias_latipes_hni
MGP_SPRETEiJ_G0034654	Apex2	98	53.903	ENSORLG00015007515	apex2	99	47.500	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0034654	Apex2	100	52.158	ENSOMEG00000003655	apex2	99	45.536	Oryzias_melastigma
MGP_SPRETEiJ_G0034654	Apex2	100	78.491	ENSOGAG00000007797	APEX2	99	78.016	Otolemur_garnettii
MGP_SPRETEiJ_G0034654	Apex2	100	80.755	ENSOARG00000005742	APEX2	100	79.497	Ovis_aries
MGP_SPRETEiJ_G0034654	Apex2	100	80.000	ENSPPAG00000035747	APEX2	100	79.151	Pan_paniscus
MGP_SPRETEiJ_G0034654	Apex2	100	78.868	ENSPPRG00000002440	APEX2	100	75.676	Panthera_pardus
MGP_SPRETEiJ_G0034654	Apex2	100	78.113	ENSPTIG00000021651	APEX2	100	75.290	Panthera_tigris_altaica
MGP_SPRETEiJ_G0034654	Apex2	100	80.377	ENSPTRG00000021946	APEX2	100	79.344	Pan_troglodytes
MGP_SPRETEiJ_G0034654	Apex2	100	79.623	ENSPANG00000003595	APEX2	100	78.764	Papio_anubis
MGP_SPRETEiJ_G0034654	Apex2	100	51.418	ENSPKIG00000007752	apex2	99	46.303	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0034654	Apex2	100	50.357	ENSPMGG00000009151	apex2	99	44.484	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0034654	Apex2	100	89.015	ENSPEMG00000016475	Apex2	100	88.571	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0034654	Apex2	99	61.303	ENSPCIG00000007633	APEX2	98	55.382	Phascolarctos_cinereus
MGP_SPRETEiJ_G0034654	Apex2	100	51.986	ENSPFOG00000000408	apex2	99	45.375	Poecilia_formosa
MGP_SPRETEiJ_G0034654	Apex2	100	51.986	ENSPLAG00000023814	apex2	99	45.375	Poecilia_latipinna
MGP_SPRETEiJ_G0034654	Apex2	100	51.625	ENSPMEG00000023222	apex2	99	44.714	Poecilia_mexicana
MGP_SPRETEiJ_G0034654	Apex2	100	80.755	ENSPPYG00000020388	APEX2	100	79.344	Pongo_abelii
MGP_SPRETEiJ_G0034654	Apex2	100	79.623	ENSPCOG00000016083	APEX2	100	77.992	Propithecus_coquereli
MGP_SPRETEiJ_G0034654	Apex2	90	77.849	ENSPVAG00000007851	APEX2	100	77.849	Pteropus_vampyrus
MGP_SPRETEiJ_G0034654	Apex2	100	53.047	ENSPNYG00000015698	apex2	99	45.694	Pundamilia_nyererei
MGP_SPRETEiJ_G0034654	Apex2	100	53.430	ENSPNAG00000011666	apex2	99	44.426	Pygocentrus_nattereri
MGP_SPRETEiJ_G0034654	Apex2	100	93.217	ENSRNOG00000000166	Apex2	100	93.217	Rattus_norvegicus
MGP_SPRETEiJ_G0034654	Apex2	100	79.623	ENSRBIG00000036500	APEX2	100	79.151	Rhinopithecus_bieti
MGP_SPRETEiJ_G0034654	Apex2	100	79.623	ENSRROG00000032674	APEX2	100	78.958	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0034654	Apex2	100	80.377	ENSSBOG00000030500	-	100	78.958	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0034654	Apex2	96	63.126	ENSSBOG00000003489	-	99	63.126	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0034654	Apex2	99	62.835	ENSSHAG00000007846	APEX2	99	54.403	Sarcophilus_harrisii
MGP_SPRETEiJ_G0034654	Apex2	100	54.093	ENSSFOG00015010354	apex2	99	49.533	Scleropages_formosus
MGP_SPRETEiJ_G0034654	Apex2	100	51.418	ENSSMAG00000012753	apex2	99	44.870	Scophthalmus_maximus
MGP_SPRETEiJ_G0034654	Apex2	100	51.601	ENSSDUG00000022892	apex2	99	46.359	Seriola_dumerili
MGP_SPRETEiJ_G0034654	Apex2	100	51.601	ENSSLDG00000024347	apex2	99	46.812	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0034654	Apex2	100	75.940	ENSSARG00000010297	APEX2	100	71.593	Sorex_araneus
MGP_SPRETEiJ_G0034654	Apex2	87	53.991	ENSSPUG00000019279	-	88	53.991	Sphenodon_punctatus
MGP_SPRETEiJ_G0034654	Apex2	100	52.688	ENSSPAG00000016279	apex2	99	46.678	Stegastes_partitus
MGP_SPRETEiJ_G0034654	Apex2	100	80.000	ENSSSCG00000012348	-	100	78.571	Sus_scrofa
MGP_SPRETEiJ_G0034654	Apex2	100	52.330	ENSTRUG00000015660	apex2	99	46.737	Takifugu_rubripes
MGP_SPRETEiJ_G0034654	Apex2	81	46.698	ENSTNIG00000003725	apex2	100	46.698	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0034654	Apex2	90	77.849	ENSTBEG00000010520	APEX2	100	77.849	Tupaia_belangeri
MGP_SPRETEiJ_G0034654	Apex2	100	80.377	ENSUAMG00000004720	APEX2	100	78.337	Ursus_americanus
MGP_SPRETEiJ_G0034654	Apex2	100	73.501	ENSUMAG00000002892	APEX2	100	73.501	Ursus_maritimus
MGP_SPRETEiJ_G0034654	Apex2	100	80.000	ENSVVUG00000005989	APEX2	100	77.992	Vulpes_vulpes
MGP_SPRETEiJ_G0034654	Apex2	100	53.818	ENSXETG00000022026	apex2	98	48.491	Xenopus_tropicalis
MGP_SPRETEiJ_G0034654	Apex2	90	58.559	ENSXCOG00000014274	apex2	100	58.559	Xiphophorus_couchianus
MGP_SPRETEiJ_G0034654	Apex2	100	52.364	ENSXMAG00000025740	apex2	99	46.060	Xiphophorus_maculatus