EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0034661 (Gene tree)
Gene ID: -
Gene Symbol: Tsr2
Alias: 2310007F12Rik
Full Name: TSR2 20S rRNA accumulation
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 11034 bases
Position: chrX:128924238-128935271
Accession: 1916749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0096794	WGG	PF10273.9	2.5e-25	1	1
MGP_SPRETEiJ_P0096795	WGG	PF10273.9	3.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0096796	-	1318	-	MGP_SPRETEiJ_P0096796	35 (aa)	-	UPI000154C740
MGP_SPRETEiJ_T0096797	-	909	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0096794	-	3791	-	MGP_SPRETEiJ_P0096794	192 (aa)	-	UPI0000EDA2A2
MGP_SPRETEiJ_T0096795	-	3799	-	MGP_SPRETEiJ_P0096795	195 (aa)	-	UPI0001B2F0AA

Gene Model

Click here to download MGP_SPRETEiJ_G0034661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0034661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSG00000158526	TSR2	100	85.864	Homo_sapiens
MGP_SPRETEiJ_G0034661	Tsr2	94	45.455	ENSAPOG00000004150	-	94	45.455	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0034661	Tsr2	99	81.675	ENSAMEG00000002469	TSR2	100	81.675	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0034661	Tsr2	70	50.000	ENSACIG00000004880	tsr2	94	50.000	Amphilophus_citrinellus
MGP_SPRETEiJ_G0034661	Tsr2	100	45.960	ENSAOCG00000015893	tsr2	97	45.960	Amphiprion_ocellaris
MGP_SPRETEiJ_G0034661	Tsr2	100	44.444	ENSAPEG00000023549	tsr2	97	45.455	Amphiprion_percula
MGP_SPRETEiJ_G0034661	Tsr2	100	44.792	ENSATEG00000019009	-	100	45.455	Anabas_testudineus
MGP_SPRETEiJ_G0034661	Tsr2	99	50.777	ENSACAG00000012270	TSR2	100	51.546	Anolis_carolinensis
MGP_SPRETEiJ_G0034661	Tsr2	99	85.340	ENSANAG00000000062	TSR2	100	85.340	Aotus_nancymaae
MGP_SPRETEiJ_G0034661	Tsr2	100	42.424	ENSACLG00000014269	tsr2	100	42.424	Astatotilapia_calliptera
MGP_SPRETEiJ_G0034661	Tsr2	99	47.959	ENSAMXG00000016817	tsr2	89	48.469	Astyanax_mexicanus
MGP_SPRETEiJ_G0034661	Tsr2	93	64.835	ENSBTAG00000018311	-	99	64.835	Bos_taurus
MGP_SPRETEiJ_G0034661	Tsr2	100	83.333	ENSBTAG00000015858	TSR2	100	83.333	Bos_taurus
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSCJAG00000000251	TSR2	100	85.864	Callithrix_jacchus
MGP_SPRETEiJ_G0034661	Tsr2	99	82.723	ENSCAFG00000016440	TSR2	100	82.723	Canis_familiaris
MGP_SPRETEiJ_G0034661	Tsr2	99	82.723	ENSCAFG00020014044	TSR2	100	82.723	Canis_lupus_dingo
MGP_SPRETEiJ_G0034661	Tsr2	94	64.286	ENSCHIG00000009963	-	94	64.286	Capra_hircus
MGP_SPRETEiJ_G0034661	Tsr2	99	79.581	ENSTSYG00000005670	-	100	79.581	Carlito_syrichta
MGP_SPRETEiJ_G0034661	Tsr2	94	71.271	ENSTSYG00000031644	-	99	71.271	Carlito_syrichta
MGP_SPRETEiJ_G0034661	Tsr2	99	71.204	ENSTSYG00000031321	-	100	71.204	Carlito_syrichta
MGP_SPRETEiJ_G0034661	Tsr2	100	79.167	ENSCPOG00000033139	TSR2	100	79.167	Cavia_porcellus
MGP_SPRETEiJ_G0034661	Tsr2	99	84.293	ENSCCAG00000025421	TSR2	100	84.293	Cebus_capucinus
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSCATG00000036868	-	100	85.864	Cercocebus_atys
MGP_SPRETEiJ_G0034661	Tsr2	100	80.729	ENSCATG00000045152	-	100	80.729	Cercocebus_atys
MGP_SPRETEiJ_G0034661	Tsr2	100	80.208	ENSCLAG00000007235	TSR2	100	80.208	Chinchilla_lanigera
MGP_SPRETEiJ_G0034661	Tsr2	99	81.152	ENSCSAG00000000402	-	100	81.152	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0034661	Tsr2	96	82.162	ENSCSAG00000012366	-	97	82.162	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0034661	Tsr2	99	83.770	ENSCHOG00000001068	TSR2	100	83.770	Choloepus_hoffmanni
MGP_SPRETEiJ_G0034661	Tsr2	94	32.086	ENSCING00000002386	-	94	32.086	Ciona_intestinalis
MGP_SPRETEiJ_G0034661	Tsr2	94	32.632	ENSCSAVG00000009298	-	94	32.632	Ciona_savignyi
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSCANG00000043156	-	100	85.864	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0034661	Tsr2	99	73.298	ENSCANG00000036773	-	97	73.298	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0034661	Tsr2	100	92.188	ENSCGRG00001023321	Tsr2	100	92.188	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0034661	Tsr2	100	92.308	ENSCGRG00000010855	Tsr2	100	92.308	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0034661	Tsr2	98	41.451	ENSCSEG00000017003	tsr2	99	42.487	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0034661	Tsr2	98	44.103	ENSCVAG00000001845	tsr2	99	45.128	Cyprinodon_variegatus
MGP_SPRETEiJ_G0034661	Tsr2	99	41.624	ENSDARG00000005772	tsr2	98	52.941	Danio_rerio
MGP_SPRETEiJ_G0034661	Tsr2	100	79.688	ENSDORG00000025574	Tsr2	100	79.688	Dipodomys_ordii
MGP_SPRETEiJ_G0034661	Tsr2	99	79.688	ENSETEG00000018510	TSR2	100	79.688	Echinops_telfairi
MGP_SPRETEiJ_G0034661	Tsr2	95	40.000	ENSEBUG00000012895	tsr2	88	48.120	Eptatretus_burgeri
MGP_SPRETEiJ_G0034661	Tsr2	100	80.729	ENSEASG00005013005	TSR2	100	80.729	Equus_asinus_asinus
MGP_SPRETEiJ_G0034661	Tsr2	100	80.208	ENSECAG00000029844	TSR2	86	80.208	Equus_caballus
MGP_SPRETEiJ_G0034661	Tsr2	98	42.188	ENSELUG00000007768	tsr2	97	43.590	Esox_lucius
MGP_SPRETEiJ_G0034661	Tsr2	99	82.723	ENSFCAG00000002226	TSR2	100	82.723	Felis_catus
MGP_SPRETEiJ_G0034661	Tsr2	100	78.125	ENSFDAG00000011554	TSR2	100	78.125	Fukomys_damarensis
MGP_SPRETEiJ_G0034661	Tsr2	94	41.989	ENSGACG00000000595	tsr2	95	42.541	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0034661	Tsr2	64	56.557	ENSGAGG00000007629	TSR2	84	49.367	Gopherus_agassizii
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSGGOG00000041368	TSR2	100	85.864	Gorilla_gorilla
MGP_SPRETEiJ_G0034661	Tsr2	100	42.424	ENSHBUG00000020989	tsr2	80	43.939	Haplochromis_burtoni
MGP_SPRETEiJ_G0034661	Tsr2	100	76.562	ENSHGLG00000002188	TSR2	100	76.562	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0034661	Tsr2	100	76.562	ENSHGLG00100001234	TSR2	100	76.562	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0034661	Tsr2	69	50.725	ENSHCOG00000017585	-	64	50.725	Hippocampus_comes
MGP_SPRETEiJ_G0034661	Tsr2	99	45.408	ENSIPUG00000012170	tsr2	100	45.408	Ictalurus_punctatus
MGP_SPRETEiJ_G0034661	Tsr2	100	85.938	ENSSTOG00000033612	TSR2	100	85.938	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0034661	Tsr2	99	85.052	ENSJJAG00000004561	Tsr2	99	85.052	Jaculus_jaculus
MGP_SPRETEiJ_G0034661	Tsr2	95	46.524	ENSKMAG00000012611	-	96	47.312	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0034661	Tsr2	65	51.969	ENSLBEG00000017316	tsr2	54	51.493	Labrus_bergylta
MGP_SPRETEiJ_G0034661	Tsr2	100	81.771	ENSLAFG00000018093	TSR2	100	81.771	Loxodonta_africana
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSMFAG00000001364	TSR2	100	85.864	Macaca_fascicularis
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSMMUG00000012612	TSR2	100	85.864	Macaca_mulatta
MGP_SPRETEiJ_G0034661	Tsr2	99	81.152	ENSMMUG00000010044	-	100	81.152	Macaca_mulatta
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSMNEG00000041996	TSR2	100	85.864	Macaca_nemestrina
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSMLEG00000032632	TSR2	100	85.864	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0034661	Tsr2	100	44.162	ENSMAMG00000011540	tsr2	100	43.147	Mastacembelus_armatus
MGP_SPRETEiJ_G0034661	Tsr2	100	42.424	ENSMZEG00005026752	tsr2	100	42.424	Maylandia_zebra
MGP_SPRETEiJ_G0034661	Tsr2	100	94.359	ENSMAUG00000012389	Tsr2	100	94.359	Mesocricetus_auratus
MGP_SPRETEiJ_G0034661	Tsr2	100	80.729	ENSMICG00000010116	TSR2	100	80.729	Microcebus_murinus
MGP_SPRETEiJ_G0034661	Tsr2	100	85.417	ENSMOCG00000006662	Tsr2	100	85.417	Microtus_ochrogaster
MGP_SPRETEiJ_G0034661	Tsr2	94	37.297	ENSMMOG00000009751	-	94	37.297	Mola_mola
MGP_SPRETEiJ_G0034661	Tsr2	99	47.000	ENSMODG00000020894	-	100	47.000	Monodelphis_domestica
MGP_SPRETEiJ_G0034661	Tsr2	95	42.623	ENSMALG00000014552	tsr2	96	42.623	Monopterus_albus
MGP_SPRETEiJ_G0034661	Tsr2	100	98.974	MGP_CAROLIEiJ_G0033491	Tsr2	100	98.974	Mus_caroli
MGP_SPRETEiJ_G0034661	Tsr2	100	100.000	ENSMUSG00000025264	Tsr2	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0034661	Tsr2	100	97.949	MGP_PahariEiJ_G0032030	Tsr2	100	97.949	Mus_pahari
MGP_SPRETEiJ_G0034661	Tsr2	99	81.675	ENSMPUG00000011436	TSR2	100	81.675	Mustela_putorius_furo
MGP_SPRETEiJ_G0034661	Tsr2	97	77.005	ENSMLUG00000010613	TSR2	97	77.005	Myotis_lucifugus
MGP_SPRETEiJ_G0034661	Tsr2	100	84.375	ENSNGAG00000021351	Tsr2	100	84.375	Nannospalax_galili
MGP_SPRETEiJ_G0034661	Tsr2	100	43.939	ENSNBRG00000007965	tsr2	100	43.939	Neolamprologus_brichardi
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSNLEG00000030041	TSR2	100	85.864	Nomascus_leucogenys
MGP_SPRETEiJ_G0034661	Tsr2	59	55.263	ENSMEUG00000006729	-	94	54.167	Notamacropus_eugenii
MGP_SPRETEiJ_G0034661	Tsr2	66	78.740	ENSOPRG00000016595	TSR2	100	78.740	Ochotona_princeps
MGP_SPRETEiJ_G0034661	Tsr2	92	72.727	ENSODEG00000019951	-	99	72.727	Octodon_degus
MGP_SPRETEiJ_G0034661	Tsr2	94	77.348	ENSODEG00000014931	-	98	77.348	Octodon_degus
MGP_SPRETEiJ_G0034661	Tsr2	100	77.949	ENSODEG00000000542	-	100	77.949	Octodon_degus
MGP_SPRETEiJ_G0034661	Tsr2	100	43.434	ENSONIG00000000763	tsr2	100	43.434	Oreochromis_niloticus
MGP_SPRETEiJ_G0034661	Tsr2	69	71.212	ENSOANG00000000707	TSR2	93	71.212	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0034661	Tsr2	86	82.530	ENSOCUG00000014714	-	100	82.530	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0034661	Tsr2	99	84.817	ENSOCUG00000027678	-	100	84.817	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0034661	Tsr2	95	43.716	ENSORLG00000022662	tsr2	96	44.262	Oryzias_latipes
MGP_SPRETEiJ_G0034661	Tsr2	95	43.716	ENSORLG00020003033	tsr2	96	44.262	Oryzias_latipes_hni
MGP_SPRETEiJ_G0034661	Tsr2	95	44.262	ENSORLG00015017253	tsr2	96	44.262	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0034661	Tsr2	100	42.564	ENSOMEG00000011483	tsr2	100	42.564	Oryzias_melastigma
MGP_SPRETEiJ_G0034661	Tsr2	100	42.564	ENSOMEG00000013975	-	100	43.077	Oryzias_melastigma
MGP_SPRETEiJ_G0034661	Tsr2	99	79.058	ENSOGAG00000003468	TSR2	100	79.058	Otolemur_garnettii
MGP_SPRETEiJ_G0034661	Tsr2	100	83.854	ENSOARG00000006467	-	100	83.854	Ovis_aries
MGP_SPRETEiJ_G0034661	Tsr2	93	60.674	ENSOARG00000009487	-	98	60.674	Ovis_aries
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSPPAG00000021242	TSR2	100	85.864	Pan_paniscus
MGP_SPRETEiJ_G0034661	Tsr2	99	82.723	ENSPPRG00000001337	TSR2	100	82.723	Panthera_pardus
MGP_SPRETEiJ_G0034661	Tsr2	100	82.292	ENSPTIG00000007138	TSR2	100	82.292	Panthera_tigris_altaica
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSPTRG00000045904	TSR2	100	85.864	Pan_troglodytes
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSPANG00000008042	-	100	85.864	Papio_anubis
MGP_SPRETEiJ_G0034661	Tsr2	94	80.663	ENSPANG00000002291	-	98	80.663	Papio_anubis
MGP_SPRETEiJ_G0034661	Tsr2	99	42.051	ENSPKIG00000023676	tsr2	100	42.714	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0034661	Tsr2	99	37.696	ENSPMGG00000002963	tsr2	100	38.660	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0034661	Tsr2	100	92.708	ENSPEMG00000015713	Tsr2	100	92.708	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0034661	Tsr2	94	41.799	ENSPMAG00000001705	tsr2	92	42.553	Petromyzon_marinus
MGP_SPRETEiJ_G0034661	Tsr2	99	50.990	ENSPCIG00000024314	-	95	50.990	Phascolarctos_cinereus
MGP_SPRETEiJ_G0034661	Tsr2	95	44.211	ENSPFOG00000011824	tsr2	96	44.211	Poecilia_formosa
MGP_SPRETEiJ_G0034661	Tsr2	95	45.161	ENSPLAG00000023520	tsr2	96	45.161	Poecilia_latipinna
MGP_SPRETEiJ_G0034661	Tsr2	98	44.271	ENSPMEG00000000360	tsr2	99	44.271	Poecilia_mexicana
MGP_SPRETEiJ_G0034661	Tsr2	98	45.641	ENSPREG00000013009	tsr2	99	45.641	Poecilia_reticulata
MGP_SPRETEiJ_G0034661	Tsr2	100	85.417	ENSPPYG00000020381	-	72	85.417	Pongo_abelii
MGP_SPRETEiJ_G0034661	Tsr2	99	79.058	ENSPCOG00000002354	TSR2	100	79.058	Propithecus_coquereli
MGP_SPRETEiJ_G0034661	Tsr2	64	81.301	ENSPVAG00000000034	TSR2	100	81.301	Pteropus_vampyrus
MGP_SPRETEiJ_G0034661	Tsr2	100	42.424	ENSPNYG00000019995	tsr2	80	43.939	Pundamilia_nyererei
MGP_SPRETEiJ_G0034661	Tsr2	99	45.876	ENSPNAG00000024167	tsr2	100	45.918	Pygocentrus_nattereri
MGP_SPRETEiJ_G0034661	Tsr2	100	96.354	ENSRNOG00000002556	NEWGENE_1562416	100	96.354	Rattus_norvegicus
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSRBIG00000024521	-	100	85.864	Rhinopithecus_bieti
MGP_SPRETEiJ_G0034661	Tsr2	100	77.604	ENSRBIG00000003999	-	90	77.604	Rhinopithecus_bieti
MGP_SPRETEiJ_G0034661	Tsr2	100	78.125	ENSRROG00000033469	-	93	78.125	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0034661	Tsr2	99	85.864	ENSRROG00000029439	-	100	85.864	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0034661	Tsr2	99	85.340	ENSSBOG00000019737	TSR2	100	85.340	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0034661	Tsr2	86	51.515	ENSSHAG00000004824	-	99	51.515	Sarcophilus_harrisii
MGP_SPRETEiJ_G0034661	Tsr2	99	41.414	ENSSFOG00015002207	tsr2	100	42.211	Scleropages_formosus
MGP_SPRETEiJ_G0034661	Tsr2	100	44.615	ENSSMAG00000012882	tsr2	100	45.641	Scophthalmus_maximus
MGP_SPRETEiJ_G0034661	Tsr2	100	45.918	ENSSDUG00000019445	tsr2	100	46.465	Seriola_dumerili
MGP_SPRETEiJ_G0034661	Tsr2	100	45.128	ENSSLDG00000005598	tsr2	100	46.465	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0034661	Tsr2	99	47.423	ENSSPUG00000019286	TSR2	99	50.521	Sphenodon_punctatus
MGP_SPRETEiJ_G0034661	Tsr2	99	80.105	ENSSSCG00000012334	TSR2	100	80.105	Sus_scrofa
MGP_SPRETEiJ_G0034661	Tsr2	94	42.935	ENSTRUG00000008947	tsr2	95	42.935	Takifugu_rubripes
MGP_SPRETEiJ_G0034661	Tsr2	90	40.113	ENSTNIG00000002173	-	99	40.000	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0034661	Tsr2	68	80.916	ENSTBEG00000016242	TSR2	100	80.952	Tupaia_belangeri
MGP_SPRETEiJ_G0034661	Tsr2	99	67.539	ENSTTRG00000003274	TSR2	100	67.539	Tursiops_truncatus
MGP_SPRETEiJ_G0034661	Tsr2	99	80.928	ENSUAMG00000009605	TSR2	100	80.928	Ursus_americanus
MGP_SPRETEiJ_G0034661	Tsr2	99	80.928	ENSUMAG00000019189	TSR2	100	80.928	Ursus_maritimus
MGP_SPRETEiJ_G0034661	Tsr2	94	73.889	ENSVPAG00000007532	TSR2	100	73.889	Vicugna_pacos
MGP_SPRETEiJ_G0034661	Tsr2	99	80.412	ENSVVUG00000002247	TSR2	99	80.412	Vulpes_vulpes
MGP_SPRETEiJ_G0034661	Tsr2	99	45.178	ENSXETG00000033574	TSR2	99	47.716	Xenopus_tropicalis
MGP_SPRETEiJ_G0034661	Tsr2	98	45.641	ENSXMAG00000024827	tsr2	90	45.641	Xiphophorus_maculatus