EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0015316 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 25657 bases
Position: chr1:31646484-31672140
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0018543	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_WSBEiJ_P0018547	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0018545	-	2047	-	-	- (aa)	-	-
MGP_WSBEiJ_T0018544	-	4398	-	MGP_WSBEiJ_P0018544	64 (aa)	-	-
MGP_WSBEiJ_T0018547	-	4218	-	MGP_WSBEiJ_P0018547	237 (aa)	-	-
MGP_WSBEiJ_T0018546	-	1087	-	-	- (aa)	-	-
MGP_WSBEiJ_T0018541	-	444	-	-	- (aa)	-	-
MGP_WSBEiJ_T0018543	-	4322	-	MGP_WSBEiJ_P0018543	237 (aa)	-	-
MGP_WSBEiJ_T0018542	-	2557	-	-	- (aa)	-	-
MGP_WSBEiJ_T0018550	-	1764	-	-	- (aa)	-	-
MGP_WSBEiJ_T0018549	-	437	-	-	- (aa)	-	-
MGP_WSBEiJ_T0018548	-	1966	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0015316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0015316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0015316	Rab23	66	37.654	MGP_WSBEiJ_G0035208	Rab9b	80	37.654
MGP_WSBEiJ_G0015316	Rab23	77	31.383	MGP_WSBEiJ_G0034802	Rab33a	79	31.383
MGP_WSBEiJ_G0015316	Rab23	64	38.462	MGP_WSBEiJ_G0018128	Rab34	60	38.462
MGP_WSBEiJ_G0015316	Rab23	72	34.682	MGP_WSBEiJ_G0019212	Rab15	81	34.682
MGP_WSBEiJ_G0015316	Rab23	73	33.143	MGP_WSBEiJ_G0018727	Rab37	79	33.143
MGP_WSBEiJ_G0015316	Rab23	61	31.507	MGP_WSBEiJ_G0032352	Hras	92	31.818
MGP_WSBEiJ_G0015316	Rab23	67	35.152	MGP_WSBEiJ_G0026440	Rab33b	72	35.152
MGP_WSBEiJ_G0015316	Rab23	74	37.500	MGP_WSBEiJ_G0031658	Rab30	87	37.500
MGP_WSBEiJ_G0015316	Rab23	68	33.129	MGP_WSBEiJ_G0030748	Rasl2-9	74	33.129
MGP_WSBEiJ_G0015316	Rab23	65	33.766	MGP_WSBEiJ_G0026208	Rab22a	79	33.766
MGP_WSBEiJ_G0015316	Rab23	67	31.765	MGP_WSBEiJ_G0029555	Rasl11a	69	31.765
MGP_WSBEiJ_G0015316	Rab23	65	36.538	MGP_WSBEiJ_G0034966	Rab39b	73	36.538
MGP_WSBEiJ_G0015316	Rab23	80	32.984	MGP_WSBEiJ_G0034060	Rab11a	92	34.752
MGP_WSBEiJ_G0015316	Rab23	66	41.139	MGP_WSBEiJ_G0034308	Rab6b	76	41.139
MGP_WSBEiJ_G0015316	Rab23	72	35.465	MGP_WSBEiJ_G0023404	Rab18	83	35.465
MGP_WSBEiJ_G0015316	Rab23	67	38.125	MGP_WSBEiJ_G0023158	Rab5a	74	38.125
MGP_WSBEiJ_G0015316	Rab23	70	34.337	MGP_WSBEiJ_G0023961	Rab1b	83	34.337
MGP_WSBEiJ_G0015316	Rab23	75	34.831	MGP_WSBEiJ_G0029154	Rab35	95	33.684
MGP_WSBEiJ_G0015316	Rab23	86	32.850	MGP_WSBEiJ_G0020607	Rab2b	94	32.850
MGP_WSBEiJ_G0015316	Rab23	74	35.227	MGP_WSBEiJ_G0018521	Rab5c	81	35.227
MGP_WSBEiJ_G0015316	Rab23	75	32.086	MGP_WSBEiJ_G0028819	Rasl11b	74	32.086
MGP_WSBEiJ_G0015316	Rab23	70	33.918	MGP_WSBEiJ_G0030174	Rab7	94	43.478
MGP_WSBEiJ_G0015316	Rab23	80	33.508	MGP_WSBEiJ_G0022822	Rab11b	97	35.417
MGP_WSBEiJ_G0015316	Rab23	81	30.570	MGP_WSBEiJ_G0023250	Rab31	94	30.570
MGP_WSBEiJ_G0015316	Rab23	69	35.119	MGP_WSBEiJ_G0023259	Rab12	57	35.119
MGP_WSBEiJ_G0015316	Rab23	66	30.909	MGP_WSBEiJ_G0018918	Dnajc27	60	30.909
MGP_WSBEiJ_G0015316	Rab23	70	34.337	MGP_WSBEiJ_G0024915	Rab14	77	34.337
MGP_WSBEiJ_G0015316	Rab23	70	34.337	MGP_WSBEiJ_G0017434	Rab1a	81	34.337
MGP_WSBEiJ_G0015316	Rab23	77	38.172	MGP_WSBEiJ_G0016745	Rab36	69	38.172
MGP_WSBEiJ_G0015316	Rab23	65	31.410	MGP_WSBEiJ_G0030644	Kras	94	32.778
MGP_WSBEiJ_G0015316	Rab23	61	32.192	MGP_WSBEiJ_G0026926	Nras	95	35.862
MGP_WSBEiJ_G0015316	Rab23	82	31.795	MGP_WSBEiJ_G0026643	Rab25	89	31.795
MGP_WSBEiJ_G0015316	Rab23	65	36.129	MGP_WSBEiJ_G0028545	Rheb	84	36.129
MGP_WSBEiJ_G0015316	Rab23	66	39.873	MGP_WSBEiJ_G0031718	Rab6a	76	39.873