EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0016699 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 39205 bases
Position: chr10:61504158-61543362
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0024754	GUCT	PF08152.12	4.7e-28	1	1
MGP_WSBEiJ_P0024754	ResIII	PF04851.15	5.8e-10	1	1
MGP_WSBEiJ_P0024754	DEAD	PF00270.29	1.8e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0024755	-	2694	-	MGP_WSBEiJ_P0024755	669 (aa)	-	-
MGP_WSBEiJ_T0024754	-	2527	XM_006514345	MGP_WSBEiJ_P0024754	734 (aa)	XP_006514408	Q99MJ9

Gene Model

Click here to download MGP_WSBEiJ_G0016699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0016699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0016699	Ddx50	54	31.383	MGP_WSBEiJ_G0034686	Ddx3x	52	33.239
MGP_WSBEiJ_G0016699	Ddx50	61	34.279	MGP_WSBEiJ_G0026155	Ddx27	52	34.129
MGP_WSBEiJ_G0016699	Ddx50	53	32.603	MGP_WSBEiJ_G0019927	Ddx41	57	32.603
MGP_WSBEiJ_G0016699	Ddx50	54	33.962	MGP_WSBEiJ_G0021388	Ddx17	55	33.962
MGP_WSBEiJ_G0016699	Ddx50	55	32.353	MGP_WSBEiJ_G0018833	Eif4a3	86	32.353
MGP_WSBEiJ_G0016699	Ddx50	90	66.446	MGP_WSBEiJ_G0016698	Ddx21	71	64.217
MGP_WSBEiJ_G0016699	Ddx50	53	33.799	MGP_WSBEiJ_G0034183	Ddx43	54	33.799
MGP_WSBEiJ_G0016699	Ddx50	55	30.623	MGP_WSBEiJ_G0021982	Eif4a2	89	30.205
MGP_WSBEiJ_G0016699	Ddx50	61	30.676	MGP_WSBEiJ_G0030576	Ddx47	94	30.175
MGP_WSBEiJ_G0016699	Ddx50	54	31.383	MGP_WSBEiJ_G0016327	D1Pas1	56	32.181
MGP_WSBEiJ_G0016699	Ddx50	54	32.162	MGP_WSBEiJ_G0017908	Eif4a1	87	31.707