EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0016784 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp3
Alias: AlphaCP-3
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 205658 bases
Position: chr10:76403274-76608931
Accession: 1890470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0025150	KH_1	PF00013.29	2.9e-55	1	3
MGP_WSBEiJ_P0025150	KH_1	PF00013.29	2.9e-55	2	3
MGP_WSBEiJ_P0025150	KH_1	PF00013.29	2.9e-55	3	3
MGP_WSBEiJ_P0025147	KH_1	PF00013.29	2.9e-55	1	3
MGP_WSBEiJ_P0025147	KH_1	PF00013.29	2.9e-55	2	3
MGP_WSBEiJ_P0025147	KH_1	PF00013.29	2.9e-55	3	3
MGP_WSBEiJ_P0025149	KH_1	PF00013.29	2.9e-55	1	3
MGP_WSBEiJ_P0025149	KH_1	PF00013.29	2.9e-55	2	3
MGP_WSBEiJ_P0025149	KH_1	PF00013.29	2.9e-55	3	3
MGP_WSBEiJ_P0025152	KH_1	PF00013.29	7.6e-19	1	1
MGP_WSBEiJ_P0025150	KH_2	PF07650.17	3.8e-15	1	1
MGP_WSBEiJ_P0025147	KH_2	PF07650.17	3.9e-15	1	1
MGP_WSBEiJ_P0025149	KH_2	PF07650.17	3.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0025152	-	605	-	MGP_WSBEiJ_P0025152	160 (aa)	-	-
MGP_WSBEiJ_T0025153	-	944	-	MGP_WSBEiJ_P0025153	226 (aa)	-	-
MGP_WSBEiJ_T0025150	-	2544	-	MGP_WSBEiJ_P0025150	370 (aa)	-	-
MGP_WSBEiJ_T0025151	-	1095	-	-	- (aa)	-	-
MGP_WSBEiJ_T0025154	-	717	-	-	- (aa)	-	-
MGP_WSBEiJ_T0025155	-	337	-	-	- (aa)	-	-
MGP_WSBEiJ_T0025149	-	1748	-	MGP_WSBEiJ_P0025149	371 (aa)	-	-
MGP_WSBEiJ_T0025148	-	1736	-	-	- (aa)	-	-
MGP_WSBEiJ_T0025147	-	2013	-	MGP_WSBEiJ_P0025147	371 (aa)	-	-
MGP_WSBEiJ_T0025146	-	2489	XM_006513916	MGP_WSBEiJ_P0025146	394 (aa)	XP_006513979	P57722

Gene Model

Click here to download MGP_WSBEiJ_G0016784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0016784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0016784	Pcbp3	86	35.000	MGP_WSBEiJ_G0029896	Igf2bp3	59	33.813
MGP_WSBEiJ_G0016784	Pcbp3	85	31.973	MGP_WSBEiJ_G0024851	Fubp3	77	31.973
MGP_WSBEiJ_G0016784	Pcbp3	66	31.250	MGP_WSBEiJ_G0027222	Fubp1	72	33.019
MGP_WSBEiJ_G0016784	Pcbp3	66	33.582	MGP_WSBEiJ_G0018351	Igf2bp1	60	33.333
MGP_WSBEiJ_G0016784	Pcbp3	79	41.667	MGP_WSBEiJ_G0019958	Hnrnpk	59	51.316
MGP_WSBEiJ_G0016784	Pcbp3	72	40.351	MGP_WSBEiJ_G0019063	Nova1	59	40.351
MGP_WSBEiJ_G0016784	Pcbp3	99	82.143	MGP_WSBEiJ_G0021724	Pcbp2	99	78.338
MGP_WSBEiJ_G0016784	Pcbp3	85	69.811	MGP_WSBEiJ_G0034347	Pcbp4	93	70.652
MGP_WSBEiJ_G0016784	Pcbp3	89	36.765	MGP_WSBEiJ_G0021970	Igf2bp2	62	33.333
MGP_WSBEiJ_G0016784	Pcbp3	99	65.873	MGP_WSBEiJ_G0030147	Pcbp1	99	68.033