EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0017324 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 21834 bases
Position: chr11:92640-114473
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0026930	zf-C2H2	PF00096.26	3.9e-26	1	5
MGP_WSBEiJ_P0026930	zf-C2H2	PF00096.26	3.9e-26	2	5
MGP_WSBEiJ_P0026930	zf-C2H2	PF00096.26	3.9e-26	3	5
MGP_WSBEiJ_P0026930	zf-C2H2	PF00096.26	3.9e-26	4	5
MGP_WSBEiJ_P0026930	zf-C2H2	PF00096.26	3.9e-26	5	5
MGP_WSBEiJ_P0026931	zf-C2H2	PF00096.26	5e-20	1	4
MGP_WSBEiJ_P0026931	zf-C2H2	PF00096.26	5e-20	2	4
MGP_WSBEiJ_P0026931	zf-C2H2	PF00096.26	5e-20	3	4
MGP_WSBEiJ_P0026931	zf-C2H2	PF00096.26	5e-20	4	4
MGP_WSBEiJ_P0026932	zf-C2H2	PF00096.26	1.8e-16	1	3
MGP_WSBEiJ_P0026932	zf-C2H2	PF00096.26	1.8e-16	2	3
MGP_WSBEiJ_P0026932	zf-C2H2	PF00096.26	1.8e-16	3	3
MGP_WSBEiJ_P0026929	zf-C2H2	PF00096.26	2.2e-15	1	3
MGP_WSBEiJ_P0026929	zf-C2H2	PF00096.26	2.2e-15	2	3
MGP_WSBEiJ_P0026929	zf-C2H2	PF00096.26	2.2e-15	3	3
MGP_WSBEiJ_P0026930	zf-met	PF12874.7	3.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0026931	-	3118	-	MGP_WSBEiJ_P0026931	641 (aa)	-	-
MGP_WSBEiJ_T0026930	-	3659	-	MGP_WSBEiJ_P0026930	687 (aa)	-	-
MGP_WSBEiJ_T0026932	-	3173	-	MGP_WSBEiJ_P0026932	537 (aa)	-	-
MGP_WSBEiJ_T0026926	-	1853	-	-	- (aa)	-	-
MGP_WSBEiJ_T0026927	-	812	-	-	- (aa)	-	-
MGP_WSBEiJ_T0026933	-	1249	-	-	- (aa)	-	-
MGP_WSBEiJ_T0026925	-	790	NR_045109	-	- (aa)	-	-
MGP_WSBEiJ_T0026935	-	652	-	-	- (aa)	-	-
MGP_WSBEiJ_T0026934	-	456	-	-	- (aa)	-	-
MGP_WSBEiJ_T0026936	-	495	-	MGP_WSBEiJ_P0026936	70 (aa)	-	-
MGP_WSBEiJ_T0026928	-	1904	-	MGP_WSBEiJ_P0026928	102 (aa)	-	-
MGP_WSBEiJ_T0026929	-	2598	-	MGP_WSBEiJ_P0026929	537 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0017324	Patz1	53	32.127	MGP_WSBEiJ_G0031074	Zfp974	85	30.168
MGP_WSBEiJ_G0017324	Patz1	53	36.047	MGP_WSBEiJ_G0030006	Prdm5	81	31.553
MGP_WSBEiJ_G0017324	Patz1	55	33.143	MGP_WSBEiJ_G0030972	Zfp94	76	33.143
MGP_WSBEiJ_G0017324	Patz1	69	37.059	MGP_WSBEiJ_G0020024	Zfp759	86	37.059