EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0017434 (Gene tree)
Gene ID: -
Gene Symbol: Rab1a
Alias: ECO:0000313|MGI:MGI:97842},GN Rab1A|Gtbp|Rab-1|Rab1|Rab1 {ECO:0000313|EMBL:EDL07829.1,GN ECO:0000313|Ensembl:ENSMUSP00000127330|Ypt1|mKIAA3012|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 25904 bases
Position: chr11:17470434-17496337
Accession: 97842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0027421	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0027419	-	962	-	-	- (aa)	-	-
MGP_WSBEiJ_T0027420	-	702	-	-	- (aa)	-	-
MGP_WSBEiJ_T0027421	-	2226	-	MGP_WSBEiJ_P0027421	205 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0017434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0017434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0017434	Rab1a	84	35.028	MGP_WSBEiJ_G0032352	Hras	93	35.028
MGP_WSBEiJ_G0017434	Rab1a	81	34.337	MGP_WSBEiJ_G0015316	Rab23	70	34.337
MGP_WSBEiJ_G0017434	Rab1a	82	32.544	MGP_WSBEiJ_G0028545	Rheb	91	32.544
MGP_WSBEiJ_G0017434	Rab1a	76	38.994	MGP_WSBEiJ_G0035208	Rab9b	79	38.994
MGP_WSBEiJ_G0017434	Rab1a	95	33.175	MGP_WSBEiJ_G0016745	Rab36	79	33.175
MGP_WSBEiJ_G0017434	Rab1a	82	45.833	MGP_WSBEiJ_G0026643	Rab25	79	45.833
MGP_WSBEiJ_G0017434	Rab1a	94	38.384	MGP_WSBEiJ_G0031718	Rab6a	94	38.384
MGP_WSBEiJ_G0017434	Rab1a	79	31.902	MGP_WSBEiJ_G0030748	Rasl2-9	73	31.902
MGP_WSBEiJ_G0017434	Rab1a	57	31.933	MGP_WSBEiJ_G0019050	Arl4a	59	31.933
MGP_WSBEiJ_G0017434	Rab1a	80	50.909	MGP_WSBEiJ_G0019212	Rab15	78	50.909
MGP_WSBEiJ_G0017434	Rab1a	57	33.058	MGP_WSBEiJ_G0024019	Arl2	61	33.058
MGP_WSBEiJ_G0017434	Rab1a	95	43.590	MGP_WSBEiJ_G0018521	Rab5c	89	43.590
MGP_WSBEiJ_G0017434	Rab1a	99	53.960	MGP_WSBEiJ_G0029154	Rab35	100	53.960
MGP_WSBEiJ_G0017434	Rab1a	80	36.527	MGP_WSBEiJ_G0034284	Mras	80	36.527
MGP_WSBEiJ_G0017434	Rab1a	68	30.496	MGP_WSBEiJ_G0024477	Arl3	72	30.496
MGP_WSBEiJ_G0017434	Rab1a	69	30.201	MGP_WSBEiJ_G0018564	Arl4d	73	30.201
MGP_WSBEiJ_G0017434	Rab1a	94	43.434	MGP_WSBEiJ_G0034802	Rab33a	83	43.434
MGP_WSBEiJ_G0017434	Rab1a	57	31.092	MGP_WSBEiJ_G0015697	Arl4c	61	31.092
MGP_WSBEiJ_G0017434	Rab1a	81	45.238	MGP_WSBEiJ_G0018727	Rab37	78	45.238
MGP_WSBEiJ_G0017434	Rab1a	57	32.203	MGP_WSBEiJ_G0030273	Arl8b	61	32.203
MGP_WSBEiJ_G0017434	Rab1a	58	34.454	MGP_WSBEiJ_G0015929	Arl8a	62	34.454
MGP_WSBEiJ_G0017434	Rab1a	62	31.061	MGP_WSBEiJ_G0026536	Arl14	65	31.061
MGP_WSBEiJ_G0017434	Rab1a	97	46.465	MGP_WSBEiJ_G0020607	Rab2b	92	46.465
MGP_WSBEiJ_G0017434	Rab1a	94	45.361	MGP_WSBEiJ_G0023404	Rab18	93	45.361
MGP_WSBEiJ_G0017434	Rab1a	100	45.581	MGP_WSBEiJ_G0022822	Rab11b	98	53.425
MGP_WSBEiJ_G0017434	Rab1a	77	40.491	MGP_WSBEiJ_G0018128	Rab34	62	40.491
MGP_WSBEiJ_G0017434	Rab1a	80	38.415	MGP_WSBEiJ_G0026926	Nras	96	39.041
MGP_WSBEiJ_G0017434	Rab1a	85	52.299	MGP_WSBEiJ_G0034060	Rab11a	100	50.000
MGP_WSBEiJ_G0017434	Rab1a	86	43.820	MGP_WSBEiJ_G0034966	Rab39b	84	43.820
MGP_WSBEiJ_G0017434	Rab1a	78	39.264	MGP_WSBEiJ_G0030174	Rab7	100	39.241
MGP_WSBEiJ_G0017434	Rab1a	94	36.410	MGP_WSBEiJ_G0034308	Rab6b	94	36.410
MGP_WSBEiJ_G0017434	Rab1a	90	39.785	MGP_WSBEiJ_G0023250	Rab31	95	39.785
MGP_WSBEiJ_G0017434	Rab1a	80	38.415	MGP_WSBEiJ_G0030644	Kras	97	35.676
MGP_WSBEiJ_G0017434	Rab1a	83	43.429	MGP_WSBEiJ_G0026440	Rab33b	76	43.429
MGP_WSBEiJ_G0017434	Rab1a	95	39.286	MGP_WSBEiJ_G0026208	Rab22a	97	39.286
MGP_WSBEiJ_G0017434	Rab1a	75	37.580	MGP_WSBEiJ_G0021547	Rabl2	67	37.580
MGP_WSBEiJ_G0017434	Rab1a	99	44.554	MGP_WSBEiJ_G0024915	Rab14	93	44.554
MGP_WSBEiJ_G0017434	Rab1a	81	50.602	MGP_WSBEiJ_G0031658	Rab30	82	50.602
MGP_WSBEiJ_G0017434	Rab1a	99	92.079	MGP_WSBEiJ_G0023961	Rab1b	100	92.079
MGP_WSBEiJ_G0017434	Rab1a	82	50.296	MGP_WSBEiJ_G0023259	Rab12	58	50.296
MGP_WSBEiJ_G0017434	Rab1a	95	43.814	MGP_WSBEiJ_G0023158	Rab5a	90	43.814