EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0017615 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnph1
Alias: AI642080|E430005G16Rik|Hnrnph|Hnrph|Hnrph1|Hnrph1 {ECO:0000313|EMBL:AAH42187.2,GN ECO:0000313|MGI:MGI:1891925}
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 12263 bases
Position: chr11:48910847-48923109
Accession: 1891925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0028101	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_WSBEiJ_P0028102	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_WSBEiJ_P0028107	zf-RNPHF	PF08080.12	1.5e-22	1	1
MGP_WSBEiJ_P0028101	RRM_1	PF00076.22	2e-32	1	3
MGP_WSBEiJ_P0028101	RRM_1	PF00076.22	2e-32	2	3
MGP_WSBEiJ_P0028101	RRM_1	PF00076.22	2e-32	3	3
MGP_WSBEiJ_P0028102	RRM_1	PF00076.22	2e-32	1	3
MGP_WSBEiJ_P0028102	RRM_1	PF00076.22	2e-32	2	3
MGP_WSBEiJ_P0028102	RRM_1	PF00076.22	2e-32	3	3
MGP_WSBEiJ_P0028107	RRM_1	PF00076.22	2.4e-32	1	3
MGP_WSBEiJ_P0028107	RRM_1	PF00076.22	2.4e-32	2	3
MGP_WSBEiJ_P0028107	RRM_1	PF00076.22	2.4e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0028111	-	1681	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028114	-	835	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028110	-	860	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028118	-	595	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028112	-	778	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028116	-	159	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028113	-	523	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028106	-	870	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028107	-	2047	-	MGP_WSBEiJ_P0028107	468 (aa)	-	-
MGP_WSBEiJ_T0028104	-	581	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028105	-	3961	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028102	-	2146	-	MGP_WSBEiJ_P0028102	449 (aa)	-	-
MGP_WSBEiJ_T0028103	-	4498	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028117	-	737	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028101	-	2348	XM_006533875	MGP_WSBEiJ_P0028101	449 (aa)	XP_006533938	O35737
MGP_WSBEiJ_T0028115	-	163	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028108	-	1116	-	-	- (aa)	-	-
MGP_WSBEiJ_T0028109	-	582	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0017615	Hnrnph1	60	95.812	MGP_WSBEiJ_G0035175	Hnrnph2	50	95.812
MGP_WSBEiJ_G0017615	Hnrnph1	90	60.923	MGP_WSBEiJ_G0016706	Hnrnph3	99	59.673
MGP_WSBEiJ_G0017615	Hnrnph1	60	64.474	MGP_WSBEiJ_G0028899	Grsf1	92	65.333