EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0017782 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 3561 bases
Position: chr11:59912533-59916093
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0028697	RRM_5	PF13893.6	2e-07	1	2
MGP_WSBEiJ_P0028697	RRM_5	PF13893.6	2e-07	2	2
MGP_WSBEiJ_P0028697	RRM_1	PF00076.22	1.1e-90	1	4
MGP_WSBEiJ_P0028697	RRM_1	PF00076.22	1.1e-90	2	4
MGP_WSBEiJ_P0028697	RRM_1	PF00076.22	1.1e-90	3	4
MGP_WSBEiJ_P0028697	RRM_1	PF00076.22	1.1e-90	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0028697	-	1485	-	MGP_WSBEiJ_P0028697	449 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0017782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0017782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0017782	-	84	36.082	MGP_WSBEiJ_G0034019	Celf6	62	36.082
MGP_WSBEiJ_G0017782	-	84	36.364	MGP_WSBEiJ_G0023480	Celf4	61	32.110
MGP_WSBEiJ_G0017782	-	68	37.634	MGP_WSBEiJ_G0016950	Celf5	65	37.634
MGP_WSBEiJ_G0017782	-	58	32.911	MGP_WSBEiJ_G0019952	Hnrnpa0	50	33.775
MGP_WSBEiJ_G0017782	-	83	30.719	MGP_WSBEiJ_G0033593	Elavl3	92	33.735
MGP_WSBEiJ_G0017782	-	80	30.114	MGP_WSBEiJ_G0032221	Tial1	94	30.233
MGP_WSBEiJ_G0017782	-	84	93.082	MGP_WSBEiJ_G0027947	-	100	93.617
MGP_WSBEiJ_G0017782	-	81	35.632	MGP_WSBEiJ_G0026790	Celf3	63	32.877
MGP_WSBEiJ_G0017782	-	81	30.000	MGP_WSBEiJ_G0032466	Elavl1	95	30.000
MGP_WSBEiJ_G0017782	-	57	36.364	MGP_WSBEiJ_G0018825	Rbfox3	67	37.500
MGP_WSBEiJ_G0017782	-	98	70.640	MGP_WSBEiJ_G0022441	Pabpc6	71	70.640
MGP_WSBEiJ_G0017782	-	73	37.500	MGP_WSBEiJ_G0025390	Celf1	70	37.500
MGP_WSBEiJ_G0017782	-	98	73.077	MGP_WSBEiJ_G0023640	Pabpc2	70	73.077
MGP_WSBEiJ_G0017782	-	98	86.349	MGP_WSBEiJ_G0021110	Pabpc1	98	86.076
MGP_WSBEiJ_G0017782	-	82	32.026	MGP_WSBEiJ_G0027789	Elavl4	88	32.026
MGP_WSBEiJ_G0017782	-	81	36.364	MGP_WSBEiJ_G0024598	Celf2	59	36.364
MGP_WSBEiJ_G0017782	-	97	67.661	MGP_WSBEiJ_G0026082	Pabpc1l	71	67.661
MGP_WSBEiJ_G0017782	-	83	32.680	MGP_WSBEiJ_G0027657	Elavl2	89	32.680
MGP_WSBEiJ_G0017782	-	80	34.524	MGP_WSBEiJ_G0030144	Tia1	95	33.333
MGP_WSBEiJ_G0017782	-	85	63.510	MGP_WSBEiJ_G0035146	Pabpc5	95	63.636
MGP_WSBEiJ_G0017782	-	88	68.712	MGP_WSBEiJ_G0026432	Pabpc4l	98	68.712