EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0018223 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 21987 bases
Position: chr11:84638262-84660248
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0030533	ResIII	PF04851.15	1.2e-05	1	1
MGP_WSBEiJ_P0030533	DEAD	PF00270.29	4.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0030533	-	3185	-	MGP_WSBEiJ_P0030533	598 (aa)	-	Q8K301
MGP_WSBEiJ_T0030534	-	553	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0018223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0018223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0018223	Ddx52	66	32.530	MGP_WSBEiJ_G0016327	D1Pas1	61	32.530
MGP_WSBEiJ_G0018223	Ddx52	60	41.071	MGP_WSBEiJ_G0018959	Ddx1	55	41.071
MGP_WSBEiJ_G0018223	Ddx52	61	30.081	MGP_WSBEiJ_G0032828	Ddx49	76	30.081
MGP_WSBEiJ_G0018223	Ddx52	68	30.456	MGP_WSBEiJ_G0021388	Ddx17	62	30.843
MGP_WSBEiJ_G0018223	Ddx52	62	31.452	MGP_WSBEiJ_G0017908	Eif4a1	88	31.452
MGP_WSBEiJ_G0018223	Ddx52	66	34.069	MGP_WSBEiJ_G0020254	Ddx4	57	34.069
MGP_WSBEiJ_G0018223	Ddx52	73	32.648	MGP_WSBEiJ_G0015953	Ddx59	64	33.741
MGP_WSBEiJ_G0018223	Ddx52	69	34.135	MGP_WSBEiJ_G0034183	Ddx43	63	34.135
MGP_WSBEiJ_G0018223	Ddx52	68	30.733	MGP_WSBEiJ_G0019927	Ddx41	66	30.733
MGP_WSBEiJ_G0018223	Ddx52	59	32.500	MGP_WSBEiJ_G0021982	Eif4a2	88	30.088
MGP_WSBEiJ_G0018223	Ddx52	70	30.222	MGP_WSBEiJ_G0021611	Ddx23	54	30.243
MGP_WSBEiJ_G0018223	Ddx52	61	30.846	MGP_WSBEiJ_G0017388	Ddx56	80	33.493
MGP_WSBEiJ_G0018223	Ddx52	58	31.144	MGP_WSBEiJ_G0029071	Ddx51	64	31.144
MGP_WSBEiJ_G0018223	Ddx52	58	33.711	MGP_WSBEiJ_G0030576	Ddx47	83	32.295
MGP_WSBEiJ_G0018223	Ddx52	70	32.045	MGP_WSBEiJ_G0034686	Ddx3x	61	32.530