EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0018255 (Gene tree)
Gene ID: -
Gene Symbol: Dhx40
Alias: 2410016C14Rik|ARG147|DDX40|PAD
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 40
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 39450 bases
Position: chr11:87608057-87647506
Accession: 1914737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0030691	DEAD	PF00270.29	7e-09	1	1
MGP_WSBEiJ_P0030692	HA2	PF04408.23	3e-15	1	1
MGP_WSBEiJ_P0030691	HA2	PF04408.23	6.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0030693	-	641	-	-	- (aa)	-	-
MGP_WSBEiJ_T0030692	-	912	-	MGP_WSBEiJ_P0030692	304 (aa)	-	-
MGP_WSBEiJ_T0030691	-	3789	-	MGP_WSBEiJ_P0030691	779 (aa)	-	Q6PE54
MGP_WSBEiJ_T0030694	-	626	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0018255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0018255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0018255	Dhx40	99	37.004	MGP_WSBEiJ_G0022941	Dhx16	61	42.012
MGP_WSBEiJ_G0018255	Dhx40	97	40.088	MGP_WSBEiJ_G0018565	Dhx8	50	43.645
MGP_WSBEiJ_G0018255	Dhx40	99	32.766	MGP_WSBEiJ_G0017983	Dhx33	89	37.348
MGP_WSBEiJ_G0018255	Dhx40	90	35.399	MGP_WSBEiJ_G0026050	Dhx35	99	35.399
MGP_WSBEiJ_G0018255	Dhx40	58	31.417	MGP_WSBEiJ_G0019489	Tdrd9	89	31.417
MGP_WSBEiJ_G0018255	Dhx40	84	40.429	MGP_WSBEiJ_G0033233	Dhx38	54	38.549
MGP_WSBEiJ_G0018255	Dhx40	83	36.653	MGP_WSBEiJ_G0029288	Dhx37	63	36.653
MGP_WSBEiJ_G0018255	Dhx40	99	34.728	MGP_WSBEiJ_G0028732	Dhx15	79	43.103