EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0018278 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 6368 bases
Position: chr11:88980479-88986846
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0030785	RRM_1	PF00076.22	6.1e-34	1	2
MGP_WSBEiJ_P0030785	RRM_1	PF00076.22	6.1e-34	2	2
MGP_WSBEiJ_P0030784	RRM_1	PF00076.22	2.4e-33	1	2
MGP_WSBEiJ_P0030784	RRM_1	PF00076.22	2.4e-33	2	2
MGP_WSBEiJ_P0030787	RRM_1	PF00076.22	2.6e-33	1	2
MGP_WSBEiJ_P0030787	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0030785	-	2943	-	MGP_WSBEiJ_P0030785	201 (aa)	-	-
MGP_WSBEiJ_T0030784	-	5347	-	MGP_WSBEiJ_P0030784	248 (aa)	-	Q6PDM2
MGP_WSBEiJ_T0030787	-	1209	-	MGP_WSBEiJ_P0030787	253 (aa)	-	-
MGP_WSBEiJ_T0030786	-	642	-	-	- (aa)	-	-
MGP_WSBEiJ_T0030789	-	401	-	MGP_WSBEiJ_P0030789	57 (aa)	-	-
MGP_WSBEiJ_T0030788	-	895	-	MGP_WSBEiJ_P0030788	105 (aa)	-	-
MGP_WSBEiJ_T0030790	-	758	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0018278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0018278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0018278	Srsf1	79	79.762	MGP_WSBEiJ_G0029144	Srsf9	78	70.330
MGP_WSBEiJ_G0018278	Srsf1	82	42.857	MGP_WSBEiJ_G0026061	Srsf6	58	40.670