EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0018283 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 394648 bases
Position: chr11:89301107-89695754
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0030807	RRM_1	PF00076.22	6.2e-34	1	2
MGP_WSBEiJ_P0030807	RRM_1	PF00076.22	6.2e-34	2	2
MGP_WSBEiJ_P0030808	RRM_1	PF00076.22	6.5e-34	1	2
MGP_WSBEiJ_P0030808	RRM_1	PF00076.22	6.5e-34	2	2
MGP_WSBEiJ_P0030811	RRM_1	PF00076.22	3.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0030811	-	405	-	MGP_WSBEiJ_P0030811	113 (aa)	-	-
MGP_WSBEiJ_T0030807	-	6344	XM_006534432	MGP_WSBEiJ_P0030807	328 (aa)	XP_006534495	Q920Q6
MGP_WSBEiJ_T0030810	-	2527	-	-	- (aa)	-	-
MGP_WSBEiJ_T0030808	-	1857	-	MGP_WSBEiJ_P0030808	346 (aa)	-	-
MGP_WSBEiJ_T0030809	-	1749	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0018283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0018283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0018283	Msi2	60	33.824	MGP_WSBEiJ_G0019334	Slirp	70	33.824
MGP_WSBEiJ_G0018283	Msi2	69	33.333	MGP_WSBEiJ_G0021744	Hnrnpa1	54	34.177
MGP_WSBEiJ_G0018283	Msi2	100	90.323	MGP_WSBEiJ_G0029148	Msi1	99	75.665
MGP_WSBEiJ_G0018283	Msi2	100	52.212	MGP_WSBEiJ_G0017632	Hnrnpab	70	48.039
MGP_WSBEiJ_G0018283	Msi2	100	44.348	MGP_WSBEiJ_G0029908	Hnrnpa2b1	56	44.348
MGP_WSBEiJ_G0018283	Msi2	100	53.982	MGP_WSBEiJ_G0028968	Hnrnpd	100	72.000
MGP_WSBEiJ_G0018283	Msi2	73	37.349	MGP_WSBEiJ_G0026201	Rbm38	70	38.095
MGP_WSBEiJ_G0018283	Msi2	100	35.398	MGP_WSBEiJ_G0028324	Tardbp	70	34.247
MGP_WSBEiJ_G0018283	Msi2	99	41.228	MGP_WSBEiJ_G0019952	Hnrnpa0	59	41.989
MGP_WSBEiJ_G0018283	Msi2	100	54.867	MGP_WSBEiJ_G0028970	Hnrnpdl	78	41.634
MGP_WSBEiJ_G0018283	Msi2	61	42.857	MGP_WSBEiJ_G0034856	Rbmx	88	45.205
MGP_WSBEiJ_G0018283	Msi2	61	42.857	MGP_WSBEiJ_G0034647	Rbm3	82	43.243
MGP_WSBEiJ_G0018283	Msi2	70	31.250	MGP_WSBEiJ_G0027657	Elavl2	72	32.632
MGP_WSBEiJ_G0018283	Msi2	50	33.333	MGP_WSBEiJ_G0015450	Boll	65	32.857
MGP_WSBEiJ_G0018283	Msi2	84	30.208	MGP_WSBEiJ_G0027789	Elavl4	78	30.088
MGP_WSBEiJ_G0018283	Msi2	99	42.400	MGP_WSBEiJ_G0016882	Dazap1	98	42.857
MGP_WSBEiJ_G0018283	Msi2	61	41.429	MGP_WSBEiJ_G0016876	Cirbp	88	43.243