EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0018521 (Gene tree)
Gene ID: -
Gene Symbol: Rab5c
Alias: AI326010|Rab5C|Rabl
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 24810 bases
Position: chr11:102550576-102575385
Accession: 105306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0031607	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0031607	-	1915	XM_006532586	MGP_WSBEiJ_P0031607	216 (aa)	XP_006532649	P35278
MGP_WSBEiJ_T0031610	-	441	-	MGP_WSBEiJ_P0031610	34 (aa)	-	-
MGP_WSBEiJ_T0031609	-	412	-	MGP_WSBEiJ_P0031609	83 (aa)	-	-
MGP_WSBEiJ_T0031608	-	1967	-	MGP_WSBEiJ_P0031608	234 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0018521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0018521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0018521	Rab5c	98	40.845	MGP_WSBEiJ_G0018727	Rab37	95	40.845
MGP_WSBEiJ_G0018521	Rab5c	89	43.590	MGP_WSBEiJ_G0017434	Rab1a	95	43.590
MGP_WSBEiJ_G0018521	Rab5c	75	36.585	MGP_WSBEiJ_G0034966	Rab39b	77	36.585
MGP_WSBEiJ_G0018521	Rab5c	89	37.113	MGP_WSBEiJ_G0029154	Rab35	96	37.436
MGP_WSBEiJ_G0018521	Rab5c	75	45.062	MGP_WSBEiJ_G0023404	Rab18	78	45.062
MGP_WSBEiJ_G0018521	Rab5c	77	42.442	MGP_WSBEiJ_G0030174	Rab7	90	49.296
MGP_WSBEiJ_G0018521	Rab5c	90	41.262	MGP_WSBEiJ_G0034060	Rab11a	88	49.630
MGP_WSBEiJ_G0018521	Rab5c	89	41.089	MGP_WSBEiJ_G0026643	Rab25	93	41.089
MGP_WSBEiJ_G0018521	Rab5c	81	44.000	MGP_WSBEiJ_G0031718	Rab6a	84	44.000
MGP_WSBEiJ_G0018521	Rab5c	91	46.939	MGP_WSBEiJ_G0023250	Rab31	98	46.939
MGP_WSBEiJ_G0018521	Rab5c	89	40.206	MGP_WSBEiJ_G0020607	Rab2b	90	40.206
MGP_WSBEiJ_G0018521	Rab5c	89	44.330	MGP_WSBEiJ_G0023961	Rab1b	96	44.330
MGP_WSBEiJ_G0018521	Rab5c	94	41.379	MGP_WSBEiJ_G0034308	Rab6b	98	41.379
MGP_WSBEiJ_G0018521	Rab5c	93	37.379	MGP_WSBEiJ_G0026440	Rab33b	89	37.379
MGP_WSBEiJ_G0018521	Rab5c	86	38.806	MGP_WSBEiJ_G0023259	Rab12	75	36.000
MGP_WSBEiJ_G0018521	Rab5c	83	30.000	MGP_WSBEiJ_G0026926	Nras	99	33.333
MGP_WSBEiJ_G0018521	Rab5c	78	32.544	MGP_WSBEiJ_G0030644	Kras	98	30.102
MGP_WSBEiJ_G0018521	Rab5c	73	31.875	MGP_WSBEiJ_G0018128	Rab34	62	31.875
MGP_WSBEiJ_G0018521	Rab5c	55	31.707	MGP_WSBEiJ_G0015929	Arl8a	62	31.707
MGP_WSBEiJ_G0018521	Rab5c	75	48.447	MGP_WSBEiJ_G0022822	Rab11b	89	49.624
MGP_WSBEiJ_G0018521	Rab5c	100	87.500	MGP_WSBEiJ_G0023158	Rab5a	100	87.500
MGP_WSBEiJ_G0018521	Rab5c	89	36.318	MGP_WSBEiJ_G0034802	Rab33a	85	36.318
MGP_WSBEiJ_G0018521	Rab5c	78	32.544	MGP_WSBEiJ_G0030748	Rasl2-9	77	32.544
MGP_WSBEiJ_G0018521	Rab5c	89	35.859	MGP_WSBEiJ_G0035208	Rab9b	97	35.859
MGP_WSBEiJ_G0018521	Rab5c	90	47.423	MGP_WSBEiJ_G0026208	Rab22a	98	47.423
MGP_WSBEiJ_G0018521	Rab5c	73	35.625	MGP_WSBEiJ_G0016745	Rab36	60	35.625
MGP_WSBEiJ_G0018521	Rab5c	81	31.250	MGP_WSBEiJ_G0028545	Rheb	93	31.250
MGP_WSBEiJ_G0018521	Rab5c	81	33.702	MGP_WSBEiJ_G0032352	Hras	94	33.702
MGP_WSBEiJ_G0018521	Rab5c	89	35.784	MGP_WSBEiJ_G0019212	Rab15	95	35.784
MGP_WSBEiJ_G0018521	Rab5c	55	31.967	MGP_WSBEiJ_G0030273	Arl8b	62	31.967
MGP_WSBEiJ_G0018521	Rab5c	78	42.012	MGP_WSBEiJ_G0031658	Rab30	83	42.012
MGP_WSBEiJ_G0018521	Rab5c	86	39.785	MGP_WSBEiJ_G0024915	Rab14	87	39.785
MGP_WSBEiJ_G0018521	Rab5c	81	35.227	MGP_WSBEiJ_G0015316	Rab23	74	35.227
MGP_WSBEiJ_G0018521	Rab5c	71	35.948	MGP_WSBEiJ_G0021547	Rabl2	67	35.948