EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_WSBEiJ_G0018825 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_wsbeij
Status
putative
Strand
Minus strand
Length
439197 bases
Position
chr11:121554750-121993946
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_WSBEiJ_P0033076Fox-1_CPF12414.82.2e-4511
MGP_WSBEiJ_P0033079Fox-1_CPF12414.82.2e-4511
MGP_WSBEiJ_P0033080Fox-1_CPF12414.82.2e-4511
MGP_WSBEiJ_P0033077Fox-1_CPF12414.82.6e-4111
MGP_WSBEiJ_P0033078Fox-1_CPF12414.82.7e-4111
MGP_WSBEiJ_P0033075Fox-1_CPF12414.83.1e-4111
MGP_WSBEiJ_P0033081Fox-1_CPF12414.81.6e-2111
MGP_WSBEiJ_P0033082RRM_1PF00076.223.1e-1911
MGP_WSBEiJ_P0033076RRM_1PF00076.221.5e-1811
MGP_WSBEiJ_P0033079RRM_1PF00076.221.5e-1811
MGP_WSBEiJ_P0033080RRM_1PF00076.221.6e-1811
MGP_WSBEiJ_P0033075RRM_1PF00076.221.9e-1811
MGP_WSBEiJ_P0033078RRM_1PF00076.222e-1811
MGP_WSBEiJ_P0033081RRM_1PF00076.221.9e-1411
MGP_WSBEiJ_P0033077RRM_1PF00076.220.0003611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_WSBEiJ_T0033084-369--- (aa)--
MGP_WSBEiJ_T0033076-2806-MGP_WSBEiJ_P0033076313 (aa)--
MGP_WSBEiJ_T0033077-1553-MGP_WSBEiJ_P0033077329 (aa)--
MGP_WSBEiJ_T0033075-3081XM_006533722MGP_WSBEiJ_P0033075360 (aa)XP_006533785Q8BIF2
MGP_WSBEiJ_T0033078-3139-MGP_WSBEiJ_P0033078374 (aa)--
MGP_WSBEiJ_T0033079-1542-MGP_WSBEiJ_P0033079313 (aa)--
MGP_WSBEiJ_T0033083-301--- (aa)--
MGP_WSBEiJ_T0033082-900-MGP_WSBEiJ_P0033082169 (aa)--
MGP_WSBEiJ_T0033081-710-MGP_WSBEiJ_P0033081145 (aa)--
MGP_WSBEiJ_T0033080-2150-MGP_WSBEiJ_P0033080327 (aa)--
Gene Model
Click here to download MGP_WSBEiJ_G0018825's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0018825's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_WSBEiJ_G0018825Rbfox36737.500MGP_WSBEiJ_G0017782-5736.364
MGP_WSBEiJ_G0018825Rbfox310071.930MGP_WSBEiJ_G0021799Rbfox19164.850
MGP_WSBEiJ_G0018825Rbfox39961.932MGP_WSBEiJ_G0021331Rbfox29161.408
MGP_WSBEiJ_G0018825Rbfox35331.868MGP_WSBEiJ_G0032221Tial18131.111
MGP_WSBEiJ_G0018825Rbfox37231.429MGP_WSBEiJ_G0015450Boll5043.939

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us