EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0019334 (Gene tree)
Gene ID: -
Gene Symbol: Slirp
Alias: 1810035L17Rik
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 6023 bases
Position: chr12:87711514-87717536
Accession: 1916394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0034725	RRM_1	PF00076.22	4.1e-14	1	1
MGP_WSBEiJ_P0034724	RRM_1	PF00076.22	8.7e-14	1	1
MGP_WSBEiJ_P0034726	RRM_1	PF00076.22	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0034726	-	335	-	MGP_WSBEiJ_P0034726	102 (aa)	-	-
MGP_WSBEiJ_T0034725	-	339	-	MGP_WSBEiJ_P0034725	112 (aa)	-	-
MGP_WSBEiJ_T0034724	-	802	-	MGP_WSBEiJ_P0034724	99 (aa)	-	Q9D8T7

Gene Model

Click here to download MGP_WSBEiJ_G0019334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0019334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0019334	Slirp	70	33.333	MGP_WSBEiJ_G0028968	Hnrnpd	71	33.333
MGP_WSBEiJ_G0019334	Slirp	73	33.846	MGP_WSBEiJ_G0017632	Hnrnpab	51	33.846
MGP_WSBEiJ_G0019334	Slirp	78	33.846	MGP_WSBEiJ_G0016882	Dazap1	89	33.846
MGP_WSBEiJ_G0019334	Slirp	70	33.824	MGP_WSBEiJ_G0018283	Msi2	60	33.824