EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0019489 (Gene tree)
Gene ID: -
Gene Symbol: Tdrd9
Alias: 4930441E05Rik
Full Name: tudor domain containing 9
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 92231 bases
Position: chr12:113584870-113677100
Accession: 1921941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0035198	TUDOR	PF00567.24	6.7e-15	1	1
MGP_WSBEiJ_P0035198	DEAD	PF00270.29	1.3e-07	1	1
MGP_WSBEiJ_P0035198	HA2	PF04408.23	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0035198	-	4813	XM_006516316	MGP_WSBEiJ_P0035198	1383 (aa)	XP_006516379	Q14BI7
MGP_WSBEiJ_T0035208	-	486	-	-	- (aa)	-	-
MGP_WSBEiJ_T0035207	-	456	-	-	- (aa)	-	-
MGP_WSBEiJ_T0035206	-	799	-	-	- (aa)	-	-
MGP_WSBEiJ_T0035205	-	3366	-	MGP_WSBEiJ_P0035205	539 (aa)	-	-
MGP_WSBEiJ_T0035204	-	3681	-	MGP_WSBEiJ_P0035204	216 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0019489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0019489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0019489	Tdrd9	95	32.448	MGP_WSBEiJ_G0017983	Dhx33	77	31.000
MGP_WSBEiJ_G0019489	Tdrd9	88	30.081	MGP_WSBEiJ_G0028732	Dhx15	71	30.081
MGP_WSBEiJ_G0019489	Tdrd9	89	31.417	MGP_WSBEiJ_G0018255	Dhx40	58	31.417
MGP_WSBEiJ_G0019489	Tdrd9	99	34.251	MGP_WSBEiJ_G0026501	Dhx36	57	34.338
MGP_WSBEiJ_G0019489	Tdrd9	95	33.843	MGP_WSBEiJ_G0034452	-	52	32.248