EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0019958 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 10347 bases
Position: chr13:57578951-57589297
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0036404	KH_1	PF00013.29	2.9e-43	1	3
MGP_WSBEiJ_P0036404	KH_1	PF00013.29	2.9e-43	2	3
MGP_WSBEiJ_P0036404	KH_1	PF00013.29	2.9e-43	3	3
MGP_WSBEiJ_P0036408	KH_1	PF00013.29	1.1e-23	1	2
MGP_WSBEiJ_P0036408	KH_1	PF00013.29	1.1e-23	2	2
MGP_WSBEiJ_P0036405	KH_1	PF00013.29	1.6e-23	1	2
MGP_WSBEiJ_P0036405	KH_1	PF00013.29	1.6e-23	2	2
MGP_WSBEiJ_P0036410	KH_1	PF00013.29	2.9e-23	1	2
MGP_WSBEiJ_P0036410	KH_1	PF00013.29	2.9e-23	2	2
MGP_WSBEiJ_P0036412	KH_1	PF00013.29	3.2e-09	1	1
MGP_WSBEiJ_P0036414	KH_1	PF00013.29	6.5e-09	1	1
MGP_WSBEiJ_P0036414	KH_2	PF07650.17	0.00011	1	1
MGP_WSBEiJ_P0036405	ROKNT	PF08067.11	3.2e-27	1	1
MGP_WSBEiJ_P0036414	ROKNT	PF08067.11	3.6e-27	1	1
MGP_WSBEiJ_P0036408	ROKNT	PF08067.11	1.9e-26	1	1
MGP_WSBEiJ_P0036404	ROKNT	PF08067.11	4.1e-26	1	1
MGP_WSBEiJ_P0036410	ROKNT	PF08067.11	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0036414	-	1053	-	MGP_WSBEiJ_P0036414	97 (aa)	-	-
MGP_WSBEiJ_T0036415	-	782	-	-	- (aa)	-	-
MGP_WSBEiJ_T0036404	-	1824	XM_006517103	MGP_WSBEiJ_P0036404	464 (aa)	XP_006517166	P61979
MGP_WSBEiJ_T0036405	-	1004	-	MGP_WSBEiJ_P0036405	299 (aa)	-	-
MGP_WSBEiJ_T0036406	-	522	-	-	- (aa)	-	-
MGP_WSBEiJ_T0036407	-	737	-	-	- (aa)	-	-
MGP_WSBEiJ_T0036413	-	775	-	-	- (aa)	-	-
MGP_WSBEiJ_T0036412	-	476	-	MGP_WSBEiJ_P0036412	87 (aa)	-	-
MGP_WSBEiJ_T0036411	-	833	-	-	- (aa)	-	-
MGP_WSBEiJ_T0036410	-	676	-	MGP_WSBEiJ_P0036410	178 (aa)	-	-
MGP_WSBEiJ_T0036408	-	900	-	MGP_WSBEiJ_P0036408	256 (aa)	-	-
MGP_WSBEiJ_T0036409	-	459	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0019958	Hnrnpk	56	39.062	MGP_WSBEiJ_G0019063	Nova1	56	39.062
MGP_WSBEiJ_G0019958	Hnrnpk	57	37.681	MGP_WSBEiJ_G0030895	Nova2	54	37.681
MGP_WSBEiJ_G0019958	Hnrnpk	78	31.724	MGP_WSBEiJ_G0030147	Pcbp1	85	42.857
MGP_WSBEiJ_G0019958	Hnrnpk	78	31.724	MGP_WSBEiJ_G0021724	Pcbp2	84	44.444
MGP_WSBEiJ_G0019958	Hnrnpk	78	32.414	MGP_WSBEiJ_G0034347	Pcbp4	86	33.728
MGP_WSBEiJ_G0019958	Hnrnpk	59	51.316	MGP_WSBEiJ_G0016784	Pcbp3	79	41.667