EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0039908	PABP	PF00658.18	2.8e-32	1	1
MGP_WSBEiJ_P0039909	PABP	PF00658.18	6.1e-32	1	1
MGP_WSBEiJ_P0039909	RRM_5	PF13893.6	4.2e-07	1	2
MGP_WSBEiJ_P0039909	RRM_5	PF13893.6	4.2e-07	2	2
MGP_WSBEiJ_P0039909	RRM_1	PF00076.22	3.1e-77	1	4
MGP_WSBEiJ_P0039909	RRM_1	PF00076.22	3.1e-77	2	4
MGP_WSBEiJ_P0039909	RRM_1	PF00076.22	3.1e-77	3	4
MGP_WSBEiJ_P0039909	RRM_1	PF00076.22	3.1e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0039913	-	1089	-	MGP_WSBEiJ_P0039913	362 (aa)	-	-
MGP_WSBEiJ_T0039912	-	866	-	-	- (aa)	-	-
MGP_WSBEiJ_T0039911	-	632	-	-	- (aa)	-	-
MGP_WSBEiJ_T0039910	-	725	-	-	- (aa)	-	-
MGP_WSBEiJ_T0039914	-	2770	-	-	- (aa)	-	-
MGP_WSBEiJ_T0039908	-	1028	XM_011245339	MGP_WSBEiJ_P0039908	193 (aa)	XP_011243641	P29341
MGP_WSBEiJ_T0039909	-	2628	-	MGP_WSBEiJ_P0039909	573 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0021110	Pabpc1	89	36.145	MGP_WSBEiJ_G0033593	Elavl3	95	36.145
MGP_WSBEiJ_G0021110	Pabpc1	61	41.558	MGP_WSBEiJ_G0034856	Rbmx	77	41.558
MGP_WSBEiJ_G0021110	Pabpc1	87	63.782	MGP_WSBEiJ_G0035146	Pabpc5	96	63.636
MGP_WSBEiJ_G0021110	Pabpc1	67	38.356	MGP_WSBEiJ_G0016950	Celf5	70	38.356
MGP_WSBEiJ_G0021110	Pabpc1	99	87.725	MGP_WSBEiJ_G0022441	Pabpc6	99	87.725
MGP_WSBEiJ_G0021110	Pabpc1	89	36.145	MGP_WSBEiJ_G0027789	Elavl4	88	36.145
MGP_WSBEiJ_G0021110	Pabpc1	88	69.277	MGP_WSBEiJ_G0026432	Pabpc4l	97	69.277
MGP_WSBEiJ_G0021110	Pabpc1	95	72.981	MGP_WSBEiJ_G0026082	Pabpc1l	99	53.492
MGP_WSBEiJ_G0021110	Pabpc1	86	38.095	MGP_WSBEiJ_G0030144	Tia1	95	30.189
MGP_WSBEiJ_G0021110	Pabpc1	55	40.278	MGP_WSBEiJ_G0032466	Elavl1	95	40.278
MGP_WSBEiJ_G0021110	Pabpc1	98	87.037	MGP_WSBEiJ_G0023640	Pabpc2	100	87.037
MGP_WSBEiJ_G0021110	Pabpc1	66	31.013	MGP_WSBEiJ_G0019952	Hnrnpa0	50	31.788
MGP_WSBEiJ_G0021110	Pabpc1	63	39.189	MGP_WSBEiJ_G0034647	Rbm3	87	40.625
MGP_WSBEiJ_G0021110	Pabpc1	88	35.000	MGP_WSBEiJ_G0032221	Tial1	94	31.008
MGP_WSBEiJ_G0021110	Pabpc1	98	86.076	MGP_WSBEiJ_G0017782	-	98	86.349
MGP_WSBEiJ_G0021110	Pabpc1	51	36.986	MGP_WSBEiJ_G0034019	Celf6	55	36.986
MGP_WSBEiJ_G0021110	Pabpc1	90	87.919	MGP_WSBEiJ_G0027947	-	100	95.035
MGP_WSBEiJ_G0021110	Pabpc1	87	37.349	MGP_WSBEiJ_G0027657	Elavl2	89	37.349
MGP_WSBEiJ_G0021110	Pabpc1	51	36.842	MGP_WSBEiJ_G0023480	Celf4	52	36.842
MGP_WSBEiJ_G0021110	Pabpc1	57	35.526	MGP_WSBEiJ_G0025390	Celf1	80	35.526
MGP_WSBEiJ_G0021110	Pabpc1	67	34.211	MGP_WSBEiJ_G0024598	Celf2	58	34.211