EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0021724 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp2
Alias: AW412548|Cbp|Hnrnpx|Hnrpx|alphaCP-2
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 30393 bases
Position: chr15:104248186-104278578
Accession: 108202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0041861	KH_1	PF00013.29	1.6e-49	1	3
MGP_WSBEiJ_P0041861	KH_1	PF00013.29	1.6e-49	2	3
MGP_WSBEiJ_P0041861	KH_1	PF00013.29	1.6e-49	3	3
MGP_WSBEiJ_P0041863	KH_1	PF00013.29	2e-49	1	3
MGP_WSBEiJ_P0041863	KH_1	PF00013.29	2e-49	2	3
MGP_WSBEiJ_P0041863	KH_1	PF00013.29	2e-49	3	3
MGP_WSBEiJ_P0041862	KH_1	PF00013.29	2.4e-49	1	3
MGP_WSBEiJ_P0041862	KH_1	PF00013.29	2.4e-49	2	3
MGP_WSBEiJ_P0041862	KH_1	PF00013.29	2.4e-49	3	3
MGP_WSBEiJ_P0041861	KH_2	PF07650.17	2e-14	1	1
MGP_WSBEiJ_P0041863	KH_2	PF07650.17	2.5e-14	1	1
MGP_WSBEiJ_P0041862	KH_2	PF07650.17	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0041861	-	2705	XM_006520582	MGP_WSBEiJ_P0041861	331 (aa)	XP_006520645	Q61990
MGP_WSBEiJ_T0041862	-	2798	-	MGP_WSBEiJ_P0041862	362 (aa)	-	-
MGP_WSBEiJ_T0041863	-	2759	-	MGP_WSBEiJ_P0041863	349 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0021724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0021724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0021724	Pcbp2	97	59.877	MGP_WSBEiJ_G0034347	Pcbp4	98	66.321
MGP_WSBEiJ_G0021724	Pcbp2	68	41.096	MGP_WSBEiJ_G0030895	Nova2	50	41.096
MGP_WSBEiJ_G0021724	Pcbp2	69	39.726	MGP_WSBEiJ_G0019063	Nova1	53	39.726
MGP_WSBEiJ_G0021724	Pcbp2	95	35.556	MGP_WSBEiJ_G0021970	Igf2bp2	62	35.556
MGP_WSBEiJ_G0021724	Pcbp2	99	78.338	MGP_WSBEiJ_G0016784	Pcbp3	99	82.143
MGP_WSBEiJ_G0021724	Pcbp2	84	44.444	MGP_WSBEiJ_G0019958	Hnrnpk	78	31.724
MGP_WSBEiJ_G0021724	Pcbp2	68	33.333	MGP_WSBEiJ_G0023220	Khsrp	51	33.333
MGP_WSBEiJ_G0021724	Pcbp2	100	81.744	MGP_WSBEiJ_G0030147	Pcbp1	100	81.744