EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0022234 (Gene tree)
Gene ID: -
Gene Symbol: Arl6
Alias: 1110018H24Rik|2210411E14Rik|ARL6|BBS3|Bbs3
Full Name: ADP-ribosylation factor-like 6
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 27781 bases
Position: chr16:58281694-58309474
Accession: 1927136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0043881	MMR_HSR1	PF01926.23	2.9e-06	1	1
MGP_WSBEiJ_P0043882	MMR_HSR1	PF01926.23	3.1e-06	1	1
MGP_WSBEiJ_P0043883	MMR_HSR1	PF01926.23	3.1e-06	1	1
MGP_WSBEiJ_P0043884	MMR_HSR1	PF01926.23	8.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0043884	-	811	-	MGP_WSBEiJ_P0043884	194 (aa)	-	-
MGP_WSBEiJ_T0043881	-	1696	XM_006522398	MGP_WSBEiJ_P0043881	186 (aa)	XP_006522461	O88848
MGP_WSBEiJ_T0043882	-	1554	-	MGP_WSBEiJ_P0043882	193 (aa)	-	-
MGP_WSBEiJ_T0043883	-	875	-	MGP_WSBEiJ_P0043883	193 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0022234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0022234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0022234	Arl6	98	35.519	MGP_WSBEiJ_G0024019	Arl2	97	35.519
MGP_WSBEiJ_G0022234	Arl6	96	41.341	MGP_WSBEiJ_G0021615	Arf3	96	41.341
MGP_WSBEiJ_G0022234	Arl6	91	37.647	MGP_WSBEiJ_G0024998	Arl5a	93	37.647
MGP_WSBEiJ_G0022234	Arl6	88	34.146	MGP_WSBEiJ_G0020750	Arl11	91	34.146
MGP_WSBEiJ_G0022234	Arl6	98	38.043	MGP_WSBEiJ_G0018405	Arl5c	99	38.043
MGP_WSBEiJ_G0022234	Arl6	61	31.579	MGP_WSBEiJ_G0019896	Arl10	53	31.579
MGP_WSBEiJ_G0022234	Arl6	92	35.870	MGP_WSBEiJ_G0015697	Arl4c	94	35.870
MGP_WSBEiJ_G0022234	Arl6	99	30.851	MGP_WSBEiJ_G0026536	Arl14	94	30.851
MGP_WSBEiJ_G0022234	Arl6	92	40.936	MGP_WSBEiJ_G0018625	Arf2	92	40.936
MGP_WSBEiJ_G0022234	Arl6	97	37.433	MGP_WSBEiJ_G0019050	Arl4a	92	37.433
MGP_WSBEiJ_G0022234	Arl6	89	31.792	MGP_WSBEiJ_G0018564	Arl4d	84	31.792
MGP_WSBEiJ_G0022234	Arl6	90	35.714	MGP_WSBEiJ_G0017020	Arl1	94	35.593
MGP_WSBEiJ_G0022234	Arl6	99	36.216	MGP_WSBEiJ_G0024477	Arl3	99	36.216
MGP_WSBEiJ_G0022234	Arl6	85	32.704	MGP_WSBEiJ_G0030273	Arl8b	82	32.704
MGP_WSBEiJ_G0022234	Arl6	90	36.527	MGP_WSBEiJ_G0029682	Arf5	91	36.527
MGP_WSBEiJ_G0022234	Arl6	54	37.143	MGP_WSBEiJ_G0017639	Sar1b	52	37.143
MGP_WSBEiJ_G0022234	Arl6	89	39.157	MGP_WSBEiJ_G0024632	Arl5b	92	39.506
MGP_WSBEiJ_G0022234	Arl6	85	32.075	MGP_WSBEiJ_G0015929	Arl8a	82	32.075
MGP_WSBEiJ_G0022234	Arl6	92	30.387	MGP_WSBEiJ_G0026267	Arfrp1	93	33.929