EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_WSBEiJ_G0022409 (Gene tree)
Gene ID
-
Gene Symbol
Synj2
Alias
AI481647|Kiaa0348|SJ2|mKIAA0348
Full Name
synaptojanin 2
Gene Type
protein_coding
Species
Mus_musculus_wsbeij
Status
putative
Strand
Plus strand
Length
118202 bases
Position
chr17:3084174-3202375
Accession
1201671
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_WSBEiJ_P0044489Exo_endo_phosPF03372.234.4e-1411
MGP_WSBEiJ_P0044499Exo_endo_phosPF03372.234.6e-1411
MGP_WSBEiJ_P0044496Exo_endo_phosPF03372.236.6e-1411
MGP_WSBEiJ_P0044493Exo_endo_phosPF03372.238.8e-1411
MGP_WSBEiJ_P0044490Exo_endo_phosPF03372.231.2e-1311
MGP_WSBEiJ_P0044486Exo_endo_phosPF03372.231.3e-1311
MGP_WSBEiJ_P0044497Exo_endo_phosPF03372.231.3e-1311
MGP_WSBEiJ_P0044494Exo_endo_phosPF03372.231.4e-1311
MGP_WSBEiJ_P0044492Exo_endo_phosPF03372.231.6e-1311
MGP_WSBEiJ_P0044491Exo_endo_phosPF03372.231.8e-1311
MGP_WSBEiJ_P0044488Exo_endo_phosPF03372.232e-1311
MGP_WSBEiJ_P0044485Exo_endo_phosPF03372.232e-1311
MGP_WSBEiJ_P0044495Exo_endo_phosPF03372.239.8e-0911
MGP_WSBEiJ_P0044500DUF1866PF08952.113e-6011
MGP_WSBEiJ_P0044499DUF1866PF08952.118.3e-6011
MGP_WSBEiJ_P0044496DUF1866PF08952.111e-5911
MGP_WSBEiJ_P0044493DUF1866PF08952.111.4e-5911
MGP_WSBEiJ_P0044486DUF1866PF08952.111.6e-5911
MGP_WSBEiJ_P0044497DUF1866PF08952.111.7e-5911
MGP_WSBEiJ_P0044490DUF1866PF08952.111.8e-5911
MGP_WSBEiJ_P0044494DUF1866PF08952.111.8e-5911
MGP_WSBEiJ_P0044492DUF1866PF08952.111.9e-5911
MGP_WSBEiJ_P0044491DUF1866PF08952.112.2e-5911
MGP_WSBEiJ_P0044488DUF1866PF08952.112.3e-5911
MGP_WSBEiJ_P0044485DUF1866PF08952.112.4e-5911
MGP_WSBEiJ_P0044489DUF1866PF08952.116.4e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_WSBEiJ_T0044489-2513-MGP_WSBEiJ_P0044489660 (aa)--
MGP_WSBEiJ_T0044488-4793-MGP_WSBEiJ_P00444881434 (aa)--
MGP_WSBEiJ_T0044498-460--- (aa)--
MGP_WSBEiJ_T0044499-2792-MGP_WSBEiJ_P0044499725 (aa)--
MGP_WSBEiJ_T0044496-2634-MGP_WSBEiJ_P0044496824 (aa)--
MGP_WSBEiJ_T0044492-5130-MGP_WSBEiJ_P00444921273 (aa)--
MGP_WSBEiJ_T0044494-4013-MGP_WSBEiJ_P00444941194 (aa)--
MGP_WSBEiJ_T0044495-2525-MGP_WSBEiJ_P0044495535 (aa)--
MGP_WSBEiJ_T0044485-4963XM_006523202MGP_WSBEiJ_P00444851479 (aa)XP_006523265Q9D2G5
MGP_WSBEiJ_T0044493-3498-MGP_WSBEiJ_P00444931016 (aa)--
MGP_WSBEiJ_T0044490-4072-MGP_WSBEiJ_P00444901216 (aa)--
MGP_WSBEiJ_T0044486-3517-MGP_WSBEiJ_P00444861144 (aa)--
MGP_WSBEiJ_T0044487-5533-MGP_WSBEiJ_P004448784 (aa)--
MGP_WSBEiJ_T0044497-3778-MGP_WSBEiJ_P00444971118 (aa)--
MGP_WSBEiJ_T0044500-1260-MGP_WSBEiJ_P0044500384 (aa)--
MGP_WSBEiJ_T0044491-4808-MGP_WSBEiJ_P00444911394 (aa)--
Gene Model
Click here to download MGP_WSBEiJ_G0022409's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0022409's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_WSBEiJ_G0022409Synj25034.421MGP_WSBEiJ_G0017329-5634.421
MGP_WSBEiJ_G0022409Synj29959.581MGP_WSBEiJ_G0022334Synj110059.770
MGP_WSBEiJ_G0022409Synj25832.653MGP_WSBEiJ_G0034793Ocrl5032.039

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us