EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0023158 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 28815 bases
Position: chr17:55092080-55120894
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0047188	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0047188	-	2362	-	MGP_WSBEiJ_P0047188	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_WSBEiJ_G0023158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0023158's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0023158	Rab5a	76	32.727	MGP_WSBEiJ_G0026926	Nras	99	34.667
MGP_WSBEiJ_G0023158	Rab5a	90	43.814	MGP_WSBEiJ_G0017434	Rab1a	95	43.814
MGP_WSBEiJ_G0023158	Rab5a	90	49.231	MGP_WSBEiJ_G0026208	Rab22a	98	49.231
MGP_WSBEiJ_G0023158	Rab5a	75	36.585	MGP_WSBEiJ_G0034966	Rab39b	77	36.585
MGP_WSBEiJ_G0023158	Rab5a	90	37.436	MGP_WSBEiJ_G0029154	Rab35	96	37.436
MGP_WSBEiJ_G0023158	Rab5a	74	40.881	MGP_WSBEiJ_G0019212	Rab15	75	40.881
MGP_WSBEiJ_G0023158	Rab5a	90	41.667	MGP_WSBEiJ_G0022822	Rab11b	89	48.120
MGP_WSBEiJ_G0023158	Rab5a	95	42.718	MGP_WSBEiJ_G0034308	Rab6b	98	42.718
MGP_WSBEiJ_G0023158	Rab5a	90	35.323	MGP_WSBEiJ_G0035208	Rab9b	97	35.323
MGP_WSBEiJ_G0023158	Rab5a	75	41.566	MGP_WSBEiJ_G0034802	Rab33a	70	41.566
MGP_WSBEiJ_G0023158	Rab5a	95	41.951	MGP_WSBEiJ_G0018727	Rab37	93	41.951
MGP_WSBEiJ_G0023158	Rab5a	56	33.065	MGP_WSBEiJ_G0030273	Arl8b	63	33.065
MGP_WSBEiJ_G0023158	Rab5a	80	31.667	MGP_WSBEiJ_G0030644	Kras	94	31.667
MGP_WSBEiJ_G0023158	Rab5a	90	46.429	MGP_WSBEiJ_G0023961	Rab1b	96	46.429
MGP_WSBEiJ_G0023158	Rab5a	81	40.782	MGP_WSBEiJ_G0030174	Rab7	99	47.436
MGP_WSBEiJ_G0023158	Rab5a	81	37.989	MGP_WSBEiJ_G0023259	Rab12	62	37.989
MGP_WSBEiJ_G0023158	Rab5a	91	47.449	MGP_WSBEiJ_G0023250	Rab31	98	47.449
MGP_WSBEiJ_G0023158	Rab5a	89	38.614	MGP_WSBEiJ_G0024915	Rab14	94	38.614
MGP_WSBEiJ_G0023158	Rab5a	77	40.351	MGP_WSBEiJ_G0026440	Rab33b	75	40.351
MGP_WSBEiJ_G0023158	Rab5a	73	33.121	MGP_WSBEiJ_G0028545	Rheb	85	33.121
MGP_WSBEiJ_G0023158	Rab5a	60	32.576	MGP_WSBEiJ_G0015929	Arl8a	66	32.576
MGP_WSBEiJ_G0023158	Rab5a	74	35.928	MGP_WSBEiJ_G0021547	Rabl2	72	35.928
MGP_WSBEiJ_G0023158	Rab5a	91	41.951	MGP_WSBEiJ_G0034060	Rab11a	88	48.148
MGP_WSBEiJ_G0023158	Rab5a	95	41.546	MGP_WSBEiJ_G0031718	Rab6a	98	41.546
MGP_WSBEiJ_G0023158	Rab5a	100	87.500	MGP_WSBEiJ_G0018521	Rab5c	100	87.500
MGP_WSBEiJ_G0023158	Rab5a	90	40.816	MGP_WSBEiJ_G0023404	Rab18	93	40.816
MGP_WSBEiJ_G0023158	Rab5a	90	40.704	MGP_WSBEiJ_G0026643	Rab25	93	40.704
MGP_WSBEiJ_G0023158	Rab5a	73	32.500	MGP_WSBEiJ_G0018128	Rab34	62	32.500
MGP_WSBEiJ_G0023158	Rab5a	78	31.737	MGP_WSBEiJ_G0030748	Rasl2-9	76	31.737
MGP_WSBEiJ_G0023158	Rab5a	55	30.159	MGP_WSBEiJ_G0019050	Arl4a	60	30.159
MGP_WSBEiJ_G0023158	Rab5a	74	38.125	MGP_WSBEiJ_G0015316	Rab23	67	38.125
MGP_WSBEiJ_G0023158	Rab5a	82	31.667	MGP_WSBEiJ_G0032352	Hras	94	31.667
MGP_WSBEiJ_G0023158	Rab5a	81	43.678	MGP_WSBEiJ_G0031658	Rab30	86	43.678
MGP_WSBEiJ_G0023158	Rab5a	78	41.916	MGP_WSBEiJ_G0020607	Rab2b	79	44.079
MGP_WSBEiJ_G0023158	Rab5a	91	30.244	MGP_WSBEiJ_G0016745	Rab36	77	30.244