EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0023551 (Gene tree)
Gene ID: -
Gene Symbol: Ankhd1
Alias: 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085
Full Name: ankyrin repeat and KH domain containing 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 111373 bases
Position: chr18:34466968-34578340
Accession: 1921733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0048323	KH_1	PF00013.29	1.8e-14	1	1
MGP_WSBEiJ_P0048313	KH_1	PF00013.29	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0048323	-	3518	-	MGP_WSBEiJ_P0048323	1020 (aa)	-	-
MGP_WSBEiJ_T0048319	-	610	-	-	- (aa)	-	-
MGP_WSBEiJ_T0048318	-	658	-	MGP_WSBEiJ_P0048318	218 (aa)	-	-
MGP_WSBEiJ_T0048315	-	8238	-	MGP_WSBEiJ_P0048315	2486 (aa)	-	-
MGP_WSBEiJ_T0048314	-	8203	-	MGP_WSBEiJ_P0048314	2486 (aa)	-	-
MGP_WSBEiJ_T0048317	-	1033	-	-	- (aa)	-	-
MGP_WSBEiJ_T0048316	-	1005	-	MGP_WSBEiJ_P0048316	334 (aa)	-	-
MGP_WSBEiJ_T0048324	-	2235	-	MGP_WSBEiJ_P0048324	636 (aa)	-	-
MGP_WSBEiJ_T0048325	-	860	-	MGP_WSBEiJ_P0048325	168 (aa)	-	-
MGP_WSBEiJ_T0048313	-	8226	-	MGP_WSBEiJ_P0048313	2549 (aa)	-	-
MGP_WSBEiJ_T0048312	-	641	-	MGP_WSBEiJ_P0048312	213 (aa)	-	E9PUR0
MGP_WSBEiJ_T0048320	-	603	-	MGP_WSBEiJ_P0048320	110 (aa)	-	-
MGP_WSBEiJ_T0048321	-	523	-	MGP_WSBEiJ_P0048321	90 (aa)	-	-
MGP_WSBEiJ_T0048322	-	499	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0023551	Ankhd1	65	89.507	MGP_WSBEiJ_G0028907	Ankrd17	71	89.358