EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0023640 (Gene tree)
Gene ID: -
Gene Symbol: Pabpc2
Alias: Pabp|Pabp+|Pabp2
Full Name: poly(A) binding protein%2C cytoplasmic 2
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 2586 bases
Position: chr18:37762072-37764657
Accession: 1349723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0048526	PABP	PF00658.18	1.7e-21	1	1
MGP_WSBEiJ_P0048526	RRM_5	PF13893.6	8.3e-10	1	2
MGP_WSBEiJ_P0048526	RRM_5	PF13893.6	8.3e-10	2	2
MGP_WSBEiJ_P0048526	RRM_1	PF00076.22	2.1e-86	1	4
MGP_WSBEiJ_P0048526	RRM_1	PF00076.22	2.1e-86	2	4
MGP_WSBEiJ_P0048526	RRM_1	PF00076.22	2.1e-86	3	4
MGP_WSBEiJ_P0048526	RRM_1	PF00076.22	2.1e-86	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0048526	-	2586	-	MGP_WSBEiJ_P0048526	628 (aa)	-	Q62029

Gene Model

Click here to download MGP_WSBEiJ_G0023640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0023640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0023640	Pabpc2	62	60.955	MGP_WSBEiJ_G0035146	Pabpc5	96	61.111
MGP_WSBEiJ_G0023640	Pabpc2	100	87.037	MGP_WSBEiJ_G0021110	Pabpc1	98	87.037
MGP_WSBEiJ_G0023640	Pabpc2	57	35.443	MGP_WSBEiJ_G0030144	Tia1	95	33.835
MGP_WSBEiJ_G0023640	Pabpc2	59	34.667	MGP_WSBEiJ_G0029179	Rbm19	70	34.667
MGP_WSBEiJ_G0023640	Pabpc2	99	69.876	MGP_WSBEiJ_G0022441	Pabpc6	99	70.031
MGP_WSBEiJ_G0023640	Pabpc2	61	34.940	MGP_WSBEiJ_G0033593	Elavl3	90	34.940
MGP_WSBEiJ_G0023640	Pabpc2	59	36.145	MGP_WSBEiJ_G0027657	Elavl2	89	36.145
MGP_WSBEiJ_G0023640	Pabpc2	50	35.036	MGP_WSBEiJ_G0032221	Tial1	92	32.500
MGP_WSBEiJ_G0023640	Pabpc2	70	73.077	MGP_WSBEiJ_G0017782	-	98	73.077
MGP_WSBEiJ_G0023640	Pabpc2	53	87.943	MGP_WSBEiJ_G0027947	-	100	87.943
MGP_WSBEiJ_G0023640	Pabpc2	63	38.554	MGP_WSBEiJ_G0016950	Celf5	98	38.554
MGP_WSBEiJ_G0023640	Pabpc2	98	56.938	MGP_WSBEiJ_G0026082	Pabpc1l	99	56.938
MGP_WSBEiJ_G0023640	Pabpc2	59	34.940	MGP_WSBEiJ_G0027789	Elavl4	88	34.940
MGP_WSBEiJ_G0023640	Pabpc2	61	64.167	MGP_WSBEiJ_G0026432	Pabpc4l	95	68.098