EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0023673 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc2
Alias: 3010002F02Rik|BC037178
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 65567 bases
Position: chr18:43002692-43068258
Accession: 2448561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0048586	R3H	PF01424.22	1.4e-10	1	1
MGP_WSBEiJ_P0048586	DEAD	PF00270.29	2.5e-09	1	1
MGP_WSBEiJ_P0048586	YTH	PF04146.15	1.2e-42	1	1
MGP_WSBEiJ_P0048586	HA2	PF04408.23	6.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0048586	-	7223	-	MGP_WSBEiJ_P0048586	1445 (aa)	-	B2RR83
MGP_WSBEiJ_T0048587	-	1327	-	-	- (aa)	-	-
MGP_WSBEiJ_T0048588	-	4290	-	MGP_WSBEiJ_P0048588	585 (aa)	-	-
MGP_WSBEiJ_T0048589	-	405	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0023673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0023673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0023673	Ythdc2	88	36.015	MGP_WSBEiJ_G0026501	Dhx36	80	42.029
MGP_WSBEiJ_G0023673	Ythdc2	72	36.504	MGP_WSBEiJ_G0023330	Dhx57	55	50.800
MGP_WSBEiJ_G0023673	Ythdc2	90	35.912	MGP_WSBEiJ_G0016006	Dhx9	56	47.685
MGP_WSBEiJ_G0023673	Ythdc2	69	31.785	MGP_WSBEiJ_G0028732	Dhx15	80	41.262
MGP_WSBEiJ_G0023673	Ythdc2	89	32.714	MGP_WSBEiJ_G0020258	Dhx29	55	46.930
MGP_WSBEiJ_G0023673	Ythdc2	70	35.392	MGP_WSBEiJ_G0034452	-	57	47.236