EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0023871 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 106605 bases
Position: chr18:82505742-82612346
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	1	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	2	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	3	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	4	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	5	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	6	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	7	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	8	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	9	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	10	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	11	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	12	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	13	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	14	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	15	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	16	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	17	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	18	19
MGP_WSBEiJ_P0049203	zf-C2H2	PF00096.26	1.1e-110	19	19
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	1	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	2	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	3	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	4	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	5	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	6	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	7	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	8	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	9	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	10	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	11	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	12	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	13	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	14	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	15	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	16	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	17	18
MGP_WSBEiJ_P0049200	zf-C2H2	PF00096.26	5.7e-108	18	18
MGP_WSBEiJ_P0049206	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_WSBEiJ_P0049200	zf-met	PF12874.7	5.8e-06	1	4
MGP_WSBEiJ_P0049200	zf-met	PF12874.7	5.8e-06	2	4
MGP_WSBEiJ_P0049200	zf-met	PF12874.7	5.8e-06	3	4
MGP_WSBEiJ_P0049200	zf-met	PF12874.7	5.8e-06	4	4
MGP_WSBEiJ_P0049203	zf-met	PF12874.7	3.3e-05	1	4
MGP_WSBEiJ_P0049203	zf-met	PF12874.7	3.3e-05	2	4
MGP_WSBEiJ_P0049203	zf-met	PF12874.7	3.3e-05	3	4
MGP_WSBEiJ_P0049203	zf-met	PF12874.7	3.3e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0049204	-	6170	-	MGP_WSBEiJ_P0049204	485 (aa)	-	-
MGP_WSBEiJ_T0049205	-	665	-	-	- (aa)	-	-
MGP_WSBEiJ_T0049206	-	404	-	MGP_WSBEiJ_P0049206	65 (aa)	-	-
MGP_WSBEiJ_T0049200	-	9597	XM_006526490	MGP_WSBEiJ_P0049200	1799 (aa)	XP_006526553	B2RR24
MGP_WSBEiJ_T0049201	-	9559	-	MGP_WSBEiJ_P0049201	1840 (aa)	-	-
MGP_WSBEiJ_T0049202	-	3227	-	MGP_WSBEiJ_P0049202	42 (aa)	-	-
MGP_WSBEiJ_T0049203	-	6059	-	MGP_WSBEiJ_P0049203	1847 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0023871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0023871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0023871	Zfp236	73	37.143	MGP_WSBEiJ_G0022552	Zscan10	79	37.143
MGP_WSBEiJ_G0023871	Zfp236	69	44.643	MGP_WSBEiJ_G0030738	Zfp865	78	44.643
MGP_WSBEiJ_G0023871	Zfp236	68	44.643	MGP_WSBEiJ_G0030739	-	66	44.643
MGP_WSBEiJ_G0023871	Zfp236	59	41.964	MGP_WSBEiJ_G0030730	Zfp628	61	42.500
MGP_WSBEiJ_G0023871	Zfp236	63	42.500	MGP_WSBEiJ_G0031001	Zfp574	95	41.304
MGP_WSBEiJ_G0023871	Zfp236	62	45.283	MGP_WSBEiJ_G0020023	Rslcan18	78	45.283
MGP_WSBEiJ_G0023871	Zfp236	80	43.902	MGP_WSBEiJ_G0020024	Zfp759	97	37.975
MGP_WSBEiJ_G0023871	Zfp236	70	50.000	MGP_WSBEiJ_G0032894	Zfp709	80	43.750
MGP_WSBEiJ_G0023871	Zfp236	61	41.228	MGP_WSBEiJ_G0025717	Zfp661	69	42.857
MGP_WSBEiJ_G0023871	Zfp236	54	46.739	MGP_WSBEiJ_G0029029	Gfi1	100	46.739
MGP_WSBEiJ_G0023871	Zfp236	69	42.727	MGP_WSBEiJ_G0028256	Zbtb17	61	42.727
MGP_WSBEiJ_G0023871	Zfp236	57	40.000	MGP_WSBEiJ_G0023268	Zbtb14	51	40.000
MGP_WSBEiJ_G0023871	Zfp236	66	45.455	MGP_WSBEiJ_G0030348	Zfp637	85	51.807
MGP_WSBEiJ_G0023871	Zfp236	55	37.584	MGP_WSBEiJ_G0021856	Snai2	82	50.000
MGP_WSBEiJ_G0023871	Zfp236	73	41.228	MGP_WSBEiJ_G0033042	Zfp423	94	41.228
MGP_WSBEiJ_G0023871	Zfp236	50	42.857	MGP_WSBEiJ_G0030741	Zfp784	79	40.244
MGP_WSBEiJ_G0023871	Zfp236	78	41.667	MGP_WSBEiJ_G0026179	Zfp64	70	42.500
MGP_WSBEiJ_G0023871	Zfp236	81	53.333	MGP_WSBEiJ_G0026178	Sall4	73	53.333
MGP_WSBEiJ_G0023871	Zfp236	78	40.690	MGP_WSBEiJ_G0033112	Zfp319	87	40.690
MGP_WSBEiJ_G0023871	Zfp236	86	31.818	MGP_WSBEiJ_G0016574	Zbtb24	54	45.794
MGP_WSBEiJ_G0023871	Zfp236	69	40.559	MGP_WSBEiJ_G0021323	Zfp251	79	45.536
MGP_WSBEiJ_G0023871	Zfp236	78	43.860	MGP_WSBEiJ_G0030006	Prdm5	87	46.739
MGP_WSBEiJ_G0023871	Zfp236	66	38.824	MGP_WSBEiJ_G0015964	Zbtb41	61	38.824
MGP_WSBEiJ_G0023871	Zfp236	81	44.304	MGP_WSBEiJ_G0029875	Repin1	99	41.667
MGP_WSBEiJ_G0023871	Zfp236	81	39.437	MGP_WSBEiJ_G0020042	Zfp748	94	41.905
MGP_WSBEiJ_G0023871	Zfp236	74	42.857	MGP_WSBEiJ_G0031267	Zfp715	69	41.935
MGP_WSBEiJ_G0023871	Zfp236	63	42.697	MGP_WSBEiJ_G0017621	Zfp454	75	42.982
MGP_WSBEiJ_G0023871	Zfp236	76	38.554	MGP_WSBEiJ_G0032198	Zfp646	90	34.940
MGP_WSBEiJ_G0023871	Zfp236	69	45.902	MGP_WSBEiJ_G0017760	Zfp867	94	45.902
MGP_WSBEiJ_G0023871	Zfp236	57	36.242	MGP_WSBEiJ_G0033354	Snai3	67	47.297
MGP_WSBEiJ_G0023871	Zfp236	62	44.068	MGP_WSBEiJ_G0030971	Zfp61	57	42.857
MGP_WSBEiJ_G0023871	Zfp236	69	42.647	MGP_WSBEiJ_G0030972	Zfp94	76	42.647
MGP_WSBEiJ_G0023871	Zfp236	70	48.864	MGP_WSBEiJ_G0026364	Mynn	62	48.864
MGP_WSBEiJ_G0023871	Zfp236	69	41.121	MGP_WSBEiJ_G0032895	Zfp882	87	45.652
MGP_WSBEiJ_G0023871	Zfp236	60	45.652	MGP_WSBEiJ_G0033271	Zfp1	67	45.652
MGP_WSBEiJ_G0023871	Zfp236	79	37.500	MGP_WSBEiJ_G0031074	Zfp974	86	45.652
MGP_WSBEiJ_G0023871	Zfp236	79	47.059	MGP_WSBEiJ_G0031137	Zfp420	99	47.059
MGP_WSBEiJ_G0023871	Zfp236	72	44.545	MGP_WSBEiJ_G0026141	Zfp334	68	46.667
MGP_WSBEiJ_G0023871	Zfp236	79	38.732	MGP_WSBEiJ_G0022547	Zfp945	79	40.000
MGP_WSBEiJ_G0023871	Zfp236	67	43.411	MGP_WSBEiJ_G0030965	Zfp235	63	43.411
MGP_WSBEiJ_G0023871	Zfp236	67	40.411	MGP_WSBEiJ_G0030964	Zfp112	52	42.697
MGP_WSBEiJ_G0023871	Zfp236	78	36.471	MGP_WSBEiJ_G0017713	Zfp672	96	41.096
MGP_WSBEiJ_G0023871	Zfp236	59	41.748	MGP_WSBEiJ_G0018345	Zfp652	60	41.748
MGP_WSBEiJ_G0023871	Zfp236	69	43.478	MGP_WSBEiJ_G0033600	Zfp872	94	43.617
MGP_WSBEiJ_G0023871	Zfp236	62	43.023	MGP_WSBEiJ_G0028696	Zbtb49	62	47.887
MGP_WSBEiJ_G0023871	Zfp236	78	44.048	MGP_WSBEiJ_G0017627	Zfp354a	90	46.364
MGP_WSBEiJ_G0023871	Zfp236	69	42.222	MGP_WSBEiJ_G0022526	Zfp677	78	42.222
MGP_WSBEiJ_G0023871	Zfp236	75	45.283	MGP_WSBEiJ_G0022528	Zfp51	75	45.283
MGP_WSBEiJ_G0023871	Zfp236	61	42.857	MGP_WSBEiJ_G0032173	E430018J23Rik	80	42.177
MGP_WSBEiJ_G0023871	Zfp236	58	48.780	MGP_WSBEiJ_G0032171	Zfp768	53	45.536