EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0024274 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 195204 bases
Position: chr19:24536306-24731509
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0050378	ResIII	PF04851.15	3.9e-08	1	1
MGP_WSBEiJ_P0050379	ResIII	PF04851.15	3.9e-08	1	1
MGP_WSBEiJ_P0050382	BRK	PF07533.16	3.3e-17	1	1
MGP_WSBEiJ_P0050378	BRK	PF07533.16	3.7e-17	1	1
MGP_WSBEiJ_P0050379	BRK	PF07533.16	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0050383	-	654	-	MGP_WSBEiJ_P0050383	176 (aa)	-	-
MGP_WSBEiJ_T0050382	-	4359	-	MGP_WSBEiJ_P0050382	1452 (aa)	-	-
MGP_WSBEiJ_T0050381	-	6018	-	MGP_WSBEiJ_P0050381	1595 (aa)	-	-
MGP_WSBEiJ_T0050380	-	5691	-	MGP_WSBEiJ_P0050380	1437 (aa)	-	-
MGP_WSBEiJ_T0050387	-	426	-	-	- (aa)	-	-
MGP_WSBEiJ_T0050385	-	1356	-	-	- (aa)	-	-
MGP_WSBEiJ_T0050378	-	5864	XM_006527281	MGP_WSBEiJ_P0050378	1586 (aa)	XP_006527344	A0A140LHE2
MGP_WSBEiJ_T0050379	-	5868	-	MGP_WSBEiJ_P0050379	1604 (aa)	-	-
MGP_WSBEiJ_T0050390	-	788	-	MGP_WSBEiJ_P0050390	224 (aa)	-	-
MGP_WSBEiJ_T0050389	-	942	-	MGP_WSBEiJ_P0050389	254 (aa)	-	-
MGP_WSBEiJ_T0050384	-	665	-	-	- (aa)	-	-
MGP_WSBEiJ_T0050392	-	1855	-	MGP_WSBEiJ_P0050392	236 (aa)	-	-
MGP_WSBEiJ_T0050393	-	835	-	MGP_WSBEiJ_P0050393	235 (aa)	-	-
MGP_WSBEiJ_T0050395	-	1457	-	MGP_WSBEiJ_P0050395	113 (aa)	-	-
MGP_WSBEiJ_T0050397	-	736	-	MGP_WSBEiJ_P0050397	119 (aa)	-	-
MGP_WSBEiJ_T0050394	-	490	-	MGP_WSBEiJ_P0050394	83 (aa)	-	-
MGP_WSBEiJ_T0050396	-	966	-	MGP_WSBEiJ_P0050396	119 (aa)	-	-
MGP_WSBEiJ_T0050391	-	879	-	MGP_WSBEiJ_P0050391	276 (aa)	-	-
MGP_WSBEiJ_T0050388	-	929	-	MGP_WSBEiJ_P0050388	254 (aa)	-	-
MGP_WSBEiJ_T0050386	-	867	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0024274	Smarca2	94	80.714	MGP_WSBEiJ_G0033578	Smarca4	93	81.122