EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0024598 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 992882 bases
Position: chr2:3684876-4677757
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0051426	RRM_1	PF00076.22	2.5e-51	1	3
MGP_WSBEiJ_P0051426	RRM_1	PF00076.22	2.5e-51	2	3
MGP_WSBEiJ_P0051426	RRM_1	PF00076.22	2.5e-51	3	3
MGP_WSBEiJ_P0051429	RRM_1	PF00076.22	2.5e-51	1	3
MGP_WSBEiJ_P0051429	RRM_1	PF00076.22	2.5e-51	2	3
MGP_WSBEiJ_P0051429	RRM_1	PF00076.22	2.5e-51	3	3
MGP_WSBEiJ_P0051435	RRM_1	PF00076.22	2.6e-51	1	3
MGP_WSBEiJ_P0051435	RRM_1	PF00076.22	2.6e-51	2	3
MGP_WSBEiJ_P0051435	RRM_1	PF00076.22	2.6e-51	3	3
MGP_WSBEiJ_P0051437	RRM_1	PF00076.22	2.6e-51	1	3
MGP_WSBEiJ_P0051437	RRM_1	PF00076.22	2.6e-51	2	3
MGP_WSBEiJ_P0051437	RRM_1	PF00076.22	2.6e-51	3	3
MGP_WSBEiJ_P0051436	RRM_1	PF00076.22	2.7e-51	1	3
MGP_WSBEiJ_P0051436	RRM_1	PF00076.22	2.7e-51	2	3
MGP_WSBEiJ_P0051436	RRM_1	PF00076.22	2.7e-51	3	3
MGP_WSBEiJ_P0051432	RRM_1	PF00076.22	3.1e-51	1	3
MGP_WSBEiJ_P0051432	RRM_1	PF00076.22	3.1e-51	2	3
MGP_WSBEiJ_P0051432	RRM_1	PF00076.22	3.1e-51	3	3
MGP_WSBEiJ_P0051427	RRM_1	PF00076.22	3.2e-51	1	3
MGP_WSBEiJ_P0051427	RRM_1	PF00076.22	3.2e-51	2	3
MGP_WSBEiJ_P0051427	RRM_1	PF00076.22	3.2e-51	3	3
MGP_WSBEiJ_P0051430	RRM_1	PF00076.22	3.2e-51	1	3
MGP_WSBEiJ_P0051430	RRM_1	PF00076.22	3.2e-51	2	3
MGP_WSBEiJ_P0051430	RRM_1	PF00076.22	3.2e-51	3	3
MGP_WSBEiJ_P0051434	RRM_1	PF00076.22	3.4e-51	1	3
MGP_WSBEiJ_P0051434	RRM_1	PF00076.22	3.4e-51	2	3
MGP_WSBEiJ_P0051434	RRM_1	PF00076.22	3.4e-51	3	3
MGP_WSBEiJ_P0051433	RRM_1	PF00076.22	4.9e-39	1	3
MGP_WSBEiJ_P0051433	RRM_1	PF00076.22	4.9e-39	2	3
MGP_WSBEiJ_P0051433	RRM_1	PF00076.22	4.9e-39	3	3
MGP_WSBEiJ_P0051438	RRM_1	PF00076.22	5.8e-39	1	3
MGP_WSBEiJ_P0051438	RRM_1	PF00076.22	5.8e-39	2	3
MGP_WSBEiJ_P0051438	RRM_1	PF00076.22	5.8e-39	3	3
MGP_WSBEiJ_P0051428	RRM_1	PF00076.22	6.1e-39	1	3
MGP_WSBEiJ_P0051428	RRM_1	PF00076.22	6.1e-39	2	3
MGP_WSBEiJ_P0051428	RRM_1	PF00076.22	6.1e-39	3	3
MGP_WSBEiJ_P0051431	RRM_1	PF00076.22	6.5e-39	1	3
MGP_WSBEiJ_P0051431	RRM_1	PF00076.22	6.5e-39	2	3
MGP_WSBEiJ_P0051431	RRM_1	PF00076.22	6.5e-39	3	3
MGP_WSBEiJ_P0051445	RRM_1	PF00076.22	7.4e-19	1	1
MGP_WSBEiJ_P0051441	RRM_1	PF00076.22	2.4e-15	1	1
MGP_WSBEiJ_P0051448	RRM_1	PF00076.22	2.2e-14	1	1
MGP_WSBEiJ_P0051450	RRM_1	PF00076.22	1e-13	1	1
MGP_WSBEiJ_P0051451	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0051450	-	529	-	MGP_WSBEiJ_P0051450	159 (aa)	-	-
MGP_WSBEiJ_T0051451	-	331	-	MGP_WSBEiJ_P0051451	46 (aa)	-	-
MGP_WSBEiJ_T0051452	-	1972	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051453	-	769	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051427	-	8662	-	MGP_WSBEiJ_P0051427	526 (aa)	-	-
MGP_WSBEiJ_T0051426	-	7642	XM_006497333	MGP_WSBEiJ_P0051426	484 (aa)	XP_006497396	Q9Z0H4
MGP_WSBEiJ_T0051429	-	7415	-	MGP_WSBEiJ_P0051429	484 (aa)	-	-
MGP_WSBEiJ_T0051428	-	8780	-	MGP_WSBEiJ_P0051428	478 (aa)	-	-
MGP_WSBEiJ_T0051443	-	405	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051442	-	4798	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051441	-	1024	-	MGP_WSBEiJ_P0051441	276 (aa)	-	-
MGP_WSBEiJ_T0051440	-	1240	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051447	-	2075	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051446	-	4815	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051445	-	630	-	MGP_WSBEiJ_P0051445	134 (aa)	-	-
MGP_WSBEiJ_T0051444	-	923	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051449	-	4142	-	-	- (aa)	-	-
MGP_WSBEiJ_T0051448	-	402	-	MGP_WSBEiJ_P0051448	92 (aa)	-	-
MGP_WSBEiJ_T0051436	-	2338	-	MGP_WSBEiJ_P0051436	490 (aa)	-	-
MGP_WSBEiJ_T0051437	-	2332	-	MGP_WSBEiJ_P0051437	488 (aa)	-	-
MGP_WSBEiJ_T0051434	-	2526	-	MGP_WSBEiJ_P0051434	520 (aa)	-	-
MGP_WSBEiJ_T0051435	-	1721	-	MGP_WSBEiJ_P0051435	488 (aa)	-	-
MGP_WSBEiJ_T0051432	-	3568	-	MGP_WSBEiJ_P0051432	508 (aa)	-	-
MGP_WSBEiJ_T0051433	-	2224	-	MGP_WSBEiJ_P0051433	440 (aa)	-	-
MGP_WSBEiJ_T0051430	-	5401	-	MGP_WSBEiJ_P0051430	526 (aa)	-	-
MGP_WSBEiJ_T0051431	-	3795	-	MGP_WSBEiJ_P0051431	472 (aa)	-	-
MGP_WSBEiJ_T0051438	-	2177	-	MGP_WSBEiJ_P0051438	460 (aa)	-	-
MGP_WSBEiJ_T0051439	-	1996	-	MGP_WSBEiJ_P0051439	443 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0024598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0024598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0024598	Celf2	51	35.443	MGP_WSBEiJ_G0030144	Tia1	83	35.443
MGP_WSBEiJ_G0024598	Celf2	57	34.884	MGP_WSBEiJ_G0026082	Pabpc1l	53	34.884
MGP_WSBEiJ_G0024598	Celf2	94	83.333	MGP_WSBEiJ_G0026790	Celf3	90	55.801
MGP_WSBEiJ_G0024598	Celf2	82	34.667	MGP_WSBEiJ_G0033593	Elavl3	73	40.741
MGP_WSBEiJ_G0024598	Celf2	57	34.211	MGP_WSBEiJ_G0022441	Pabpc6	51	34.211
MGP_WSBEiJ_G0024598	Celf2	61	35.714	MGP_WSBEiJ_G0015450	Boll	57	32.000
MGP_WSBEiJ_G0024598	Celf2	61	38.272	MGP_WSBEiJ_G0027789	Elavl4	81	38.272
MGP_WSBEiJ_G0024598	Celf2	100	88.060	MGP_WSBEiJ_G0025390	Celf1	100	80.082
MGP_WSBEiJ_G0024598	Celf2	92	53.659	MGP_WSBEiJ_G0016950	Celf5	69	63.504
MGP_WSBEiJ_G0024598	Celf2	61	34.177	MGP_WSBEiJ_G0032221	Tial1	65	31.481
MGP_WSBEiJ_G0024598	Celf2	59	36.364	MGP_WSBEiJ_G0017782	-	81	36.364
MGP_WSBEiJ_G0024598	Celf2	82	33.333	MGP_WSBEiJ_G0016876	Cirbp	80	32.558
MGP_WSBEiJ_G0024598	Celf2	77	39.474	MGP_WSBEiJ_G0034510	Rbms3	75	37.079
MGP_WSBEiJ_G0024598	Celf2	58	34.211	MGP_WSBEiJ_G0021110	Pabpc1	67	34.211
MGP_WSBEiJ_G0024598	Celf2	79	80.952	MGP_WSBEiJ_G0034019	Celf6	91	45.567
MGP_WSBEiJ_G0024598	Celf2	88	32.099	MGP_WSBEiJ_G0034856	Rbmx	78	30.000
MGP_WSBEiJ_G0024598	Celf2	90	55.556	MGP_WSBEiJ_G0023480	Celf4	96	45.992
MGP_WSBEiJ_G0024598	Celf2	64	43.210	MGP_WSBEiJ_G0032466	Elavl1	81	43.210
MGP_WSBEiJ_G0024598	Celf2	87	33.333	MGP_WSBEiJ_G0027657	Elavl2	83	39.506
MGP_WSBEiJ_G0024598	Celf2	56	35.526	MGP_WSBEiJ_G0027947	-	99	30.657