EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0024632 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 33038 bases
Position: chr2:12539324-12572361
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0051662	MMR_HSR1	PF01926.23	8.4e-07	1	1
MGP_WSBEiJ_P0051664	MMR_HSR1	PF01926.23	9.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0051667	-	778	-	MGP_WSBEiJ_P0051667	30 (aa)	-	-
MGP_WSBEiJ_T0051666	-	481	-	MGP_WSBEiJ_P0051666	35 (aa)	-	-
MGP_WSBEiJ_T0051665	-	1035	-	MGP_WSBEiJ_P0051665	40 (aa)	-	-
MGP_WSBEiJ_T0051664	-	6969	-	MGP_WSBEiJ_P0051664	180 (aa)	-	-
MGP_WSBEiJ_T0051662	-	6921	XM_017319316	MGP_WSBEiJ_P0051662	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_WSBEiJ_T0051669	-	706	-	MGP_WSBEiJ_P0051669	56 (aa)	-	-
MGP_WSBEiJ_T0051668	-	3209	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0024632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0024632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0024632	Arl5b	98	81.437	MGP_WSBEiJ_G0024998	Arl5a	100	79.888
MGP_WSBEiJ_G0024632	Arl5b	92	37.126	MGP_WSBEiJ_G0026267	Arfrp1	84	40.196
MGP_WSBEiJ_G0024632	Arl5b	96	44.512	MGP_WSBEiJ_G0024019	Arl2	90	44.242
MGP_WSBEiJ_G0024632	Arl5b	98	49.718	MGP_WSBEiJ_G0018625	Arf2	98	49.718
MGP_WSBEiJ_G0024632	Arl5b	92	39.506	MGP_WSBEiJ_G0022234	Arl6	89	39.157
MGP_WSBEiJ_G0024632	Arl5b	97	74.286	MGP_WSBEiJ_G0018405	Arl5c	98	74.286
MGP_WSBEiJ_G0024632	Arl5b	98	49.718	MGP_WSBEiJ_G0021615	Arf3	98	49.718
MGP_WSBEiJ_G0024632	Arl5b	83	30.667	MGP_WSBEiJ_G0030273	Arl8b	78	30.667
MGP_WSBEiJ_G0024632	Arl5b	99	44.444	MGP_WSBEiJ_G0029682	Arf5	100	44.444
MGP_WSBEiJ_G0024632	Arl5b	94	43.373	MGP_WSBEiJ_G0019050	Arl4a	85	43.787
MGP_WSBEiJ_G0024632	Arl5b	93	40.000	MGP_WSBEiJ_G0020750	Arl11	91	40.000
MGP_WSBEiJ_G0024632	Arl5b	94	39.759	MGP_WSBEiJ_G0018564	Arl4d	83	39.759
MGP_WSBEiJ_G0024632	Arl5b	84	33.562	MGP_WSBEiJ_G0015929	Arl8a	78	33.553
MGP_WSBEiJ_G0024632	Arl5b	90	42.593	MGP_WSBEiJ_G0015697	Arl4c	85	42.169
MGP_WSBEiJ_G0024632	Arl5b	99	43.094	MGP_WSBEiJ_G0024477	Arl3	99	43.094
MGP_WSBEiJ_G0024632	Arl5b	96	50.000	MGP_WSBEiJ_G0017020	Arl1	99	48.889
MGP_WSBEiJ_G0024632	Arl5b	67	30.952	MGP_WSBEiJ_G0026208	Rab22a	61	30.952
MGP_WSBEiJ_G0024632	Arl5b	96	37.500	MGP_WSBEiJ_G0026536	Arl14	90	37.500
MGP_WSBEiJ_G0024632	Arl5b	65	34.211	MGP_WSBEiJ_G0019896	Arl10	55	34.211