EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0025390 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 85031 bases
Position: chr2:91644984-91730014
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0054978	RRM_1	PF00076.22	4e-52	1	3
MGP_WSBEiJ_P0054978	RRM_1	PF00076.22	4e-52	2	3
MGP_WSBEiJ_P0054978	RRM_1	PF00076.22	4e-52	3	3
MGP_WSBEiJ_P0054972	RRM_1	PF00076.22	4.1e-52	1	3
MGP_WSBEiJ_P0054972	RRM_1	PF00076.22	4.1e-52	2	3
MGP_WSBEiJ_P0054972	RRM_1	PF00076.22	4.1e-52	3	3
MGP_WSBEiJ_P0054977	RRM_1	PF00076.22	5.2e-52	1	3
MGP_WSBEiJ_P0054977	RRM_1	PF00076.22	5.2e-52	2	3
MGP_WSBEiJ_P0054977	RRM_1	PF00076.22	5.2e-52	3	3
MGP_WSBEiJ_P0054975	RRM_1	PF00076.22	6.6e-52	1	3
MGP_WSBEiJ_P0054975	RRM_1	PF00076.22	6.6e-52	2	3
MGP_WSBEiJ_P0054975	RRM_1	PF00076.22	6.6e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0054974	-	478	-	-	- (aa)	-	-
MGP_WSBEiJ_T0054975	-	6959	-	MGP_WSBEiJ_P0054975	543 (aa)	-	-
MGP_WSBEiJ_T0054976	-	271	-	-	- (aa)	-	-
MGP_WSBEiJ_T0054977	-	7577	-	MGP_WSBEiJ_P0054977	513 (aa)	-	-
MGP_WSBEiJ_T0054971	-	350	-	-	- (aa)	-	-
MGP_WSBEiJ_T0054972	-	7849	-	MGP_WSBEiJ_P0054972	487 (aa)	-	-
MGP_WSBEiJ_T0054973	-	426	-	-	- (aa)	-	-
MGP_WSBEiJ_T0054978	-	4430	-	MGP_WSBEiJ_P0054978	483 (aa)	-	-
MGP_WSBEiJ_T0054979	-	486	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0025390	Celf1	80	35.526	MGP_WSBEiJ_G0021110	Pabpc1	57	35.526
MGP_WSBEiJ_G0025390	Celf1	57	37.879	MGP_WSBEiJ_G0026432	Pabpc4l	65	34.211
MGP_WSBEiJ_G0025390	Celf1	70	37.500	MGP_WSBEiJ_G0017782	-	73	37.500
MGP_WSBEiJ_G0025390	Celf1	98	45.135	MGP_WSBEiJ_G0034019	Celf6	91	45.549
MGP_WSBEiJ_G0025390	Celf1	100	45.200	MGP_WSBEiJ_G0023480	Celf4	100	42.430
MGP_WSBEiJ_G0025390	Celf1	97	43.320	MGP_WSBEiJ_G0026790	Celf3	99	43.830
MGP_WSBEiJ_G0025390	Celf1	61	45.679	MGP_WSBEiJ_G0032466	Elavl1	83	45.679
MGP_WSBEiJ_G0025390	Celf1	98	44.650	MGP_WSBEiJ_G0016950	Celf5	73	59.859
MGP_WSBEiJ_G0025390	Celf1	57	43.590	MGP_WSBEiJ_G0033593	Elavl3	71	42.391
MGP_WSBEiJ_G0025390	Celf1	65	36.842	MGP_WSBEiJ_G0027947	-	86	32.258
MGP_WSBEiJ_G0025390	Celf1	100	80.082	MGP_WSBEiJ_G0024598	Celf2	100	88.060
MGP_WSBEiJ_G0025390	Celf1	62	40.741	MGP_WSBEiJ_G0027789	Elavl4	78	40.741
MGP_WSBEiJ_G0025390	Celf1	69	41.975	MGP_WSBEiJ_G0027657	Elavl2	85	41.975
MGP_WSBEiJ_G0025390	Celf1	52	35.526	MGP_WSBEiJ_G0022441	Pabpc6	53	35.526
MGP_WSBEiJ_G0025390	Celf1	53	43.421	MGP_WSBEiJ_G0034510	Rbms3	68	43.421