EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0025974 (Gene tree)
Gene ID: -
Gene Symbol: Raly
Alias: AI663842|Merc
Full Name: hnRNP-associated with lethal yellow
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 76760 bases
Position: chr2:158472502-158549261
Accession: 97850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0057451	RRM_1	PF00076.22	1.8e-12	1	1
MGP_WSBEiJ_P0057449	RRM_1	PF00076.22	3.7e-12	1	1
MGP_WSBEiJ_P0057448	RRM_1	PF00076.22	7.1e-12	1	1
MGP_WSBEiJ_P0057453	RRM_1	PF00076.22	7.1e-12	1	1
MGP_WSBEiJ_P0057454	RRM_1	PF00076.22	7.4e-12	1	1
MGP_WSBEiJ_P0057450	RRM_1	PF00076.22	7.9e-12	1	1
MGP_WSBEiJ_P0057452	RRM_1	PF00076.22	7.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0057449	-	851	-	MGP_WSBEiJ_P0057449	211 (aa)	-	-
MGP_WSBEiJ_T0057448	-	1709	XM_006499013	MGP_WSBEiJ_P0057448	296 (aa)	XP_006499076	Q64012
MGP_WSBEiJ_T0057458	-	337	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057456	-	404	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057454	-	1100	-	MGP_WSBEiJ_P0057454	298 (aa)	-	-
MGP_WSBEiJ_T0057455	-	1588	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057452	-	1802	-	MGP_WSBEiJ_P0057452	312 (aa)	-	-
MGP_WSBEiJ_T0057453	-	1747	-	MGP_WSBEiJ_P0057453	296 (aa)	-	-
MGP_WSBEiJ_T0057450	-	1759	-	MGP_WSBEiJ_P0057450	312 (aa)	-	-
MGP_WSBEiJ_T0057451	-	546	-	MGP_WSBEiJ_P0057451	141 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0025974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0025974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0025974	Raly	51	32.500	MGP_WSBEiJ_G0034856	Rbmx	77	32.500
MGP_WSBEiJ_G0025974	Raly	54	35.526	MGP_WSBEiJ_G0026061	Srsf6	56	35.526
MGP_WSBEiJ_G0025974	Raly	72	74.757	MGP_WSBEiJ_G0020603	Hnrnpc	72	52.814