EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0026009 (Gene tree)
Gene ID: -
Gene Symbol: Rbm39
Alias: 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|Caper|Caper alpha|R75070|Rnpc2|caper
Full Name: RNA binding motif protein 39
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 37245 bases
Position: chr2:159868394-159905638
Accession: 2157953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0057660	RRM_1	PF00076.22	1.2e-41	1	2
MGP_WSBEiJ_P0057660	RRM_1	PF00076.22	1.2e-41	2	2
MGP_WSBEiJ_P0057661	RRM_1	PF00076.22	1.7e-41	1	2
MGP_WSBEiJ_P0057661	RRM_1	PF00076.22	1.7e-41	2	2
MGP_WSBEiJ_P0057662	RRM_1	PF00076.22	1.7e-41	1	2
MGP_WSBEiJ_P0057662	RRM_1	PF00076.22	1.7e-41	2	2
MGP_WSBEiJ_P0057666	RRM_1	PF00076.22	2.2e-22	1	1
MGP_WSBEiJ_P0057667	RRM_1	PF00076.22	9.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0057684	-	715	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057683	-	1008	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057682	-	699	-	MGP_WSBEiJ_P0057682	40 (aa)	-	-
MGP_WSBEiJ_T0057681	-	672	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057680	-	667	-	MGP_WSBEiJ_P0057680	38 (aa)	-	-
MGP_WSBEiJ_T0057665	-	2127	-	MGP_WSBEiJ_P0057665	47 (aa)	-	-
MGP_WSBEiJ_T0057664	-	2120	-	MGP_WSBEiJ_P0057664	40 (aa)	-	-
MGP_WSBEiJ_T0057667	-	1090	-	MGP_WSBEiJ_P0057667	273 (aa)	-	-
MGP_WSBEiJ_T0057666	-	931	-	MGP_WSBEiJ_P0057666	310 (aa)	-	-
MGP_WSBEiJ_T0057661	-	2580	-	MGP_WSBEiJ_P0057661	524 (aa)	-	-
MGP_WSBEiJ_T0057660	-	2810	XM_006498832	MGP_WSBEiJ_P0057660	530 (aa)	XP_006498895	Q8VH51
MGP_WSBEiJ_T0057663	-	2744	-	MGP_WSBEiJ_P0057663	415 (aa)	-	-
MGP_WSBEiJ_T0057662	-	2711	-	MGP_WSBEiJ_P0057662	524 (aa)	-	-
MGP_WSBEiJ_T0057669	-	546	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057668	-	695	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057678	-	585	-	MGP_WSBEiJ_P0057678	62 (aa)	-	-
MGP_WSBEiJ_T0057679	-	743	-	MGP_WSBEiJ_P0057679	40 (aa)	-	-
MGP_WSBEiJ_T0057672	-	497	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057673	-	712	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057670	-	1447	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057671	-	754	-	MGP_WSBEiJ_P0057671	156 (aa)	-	-
MGP_WSBEiJ_T0057676	-	593	-	MGP_WSBEiJ_P0057676	39 (aa)	-	-
MGP_WSBEiJ_T0057677	-	708	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057674	-	685	-	-	- (aa)	-	-
MGP_WSBEiJ_T0057675	-	707	-	MGP_WSBEiJ_P0057675	40 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0026009	Rbm39	52	34.483	MGP_WSBEiJ_G0016882	Dazap1	94	34.483