EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0026061 (Gene tree)
Gene ID: -
Gene Symbol: Srsf6
Alias: 1210001E11Rik|AI314910|AW146126|Sfrs6|Srp55
Full Name: serine/arginine-rich splicing factor 6
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 5593 bases
Position: chr2:166975376-166980968
Accession: 1915246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0057955	RRM_1	PF00076.22	8.2e-32	1	2
MGP_WSBEiJ_P0057955	RRM_1	PF00076.22	8.2e-32	2	2
MGP_WSBEiJ_P0057957	RRM_1	PF00076.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0057957	-	515	-	MGP_WSBEiJ_P0057957	135 (aa)	-	-
MGP_WSBEiJ_T0057956	-	1666	-	MGP_WSBEiJ_P0057956	135 (aa)	-	-
MGP_WSBEiJ_T0057955	-	3530	-	MGP_WSBEiJ_P0057955	339 (aa)	-	-
MGP_WSBEiJ_T0057954	-	2895	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0026061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0026061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0026061	Srsf6	58	40.670	MGP_WSBEiJ_G0018278	Srsf1	82	42.857
MGP_WSBEiJ_G0026061	Srsf6	61	31.868	MGP_WSBEiJ_G0016876	Cirbp	84	31.868
MGP_WSBEiJ_G0026061	Srsf6	56	35.526	MGP_WSBEiJ_G0025974	Raly	54	35.526
MGP_WSBEiJ_G0026061	Srsf6	51	47.297	MGP_WSBEiJ_G0029144	Srsf9	70	38.674
MGP_WSBEiJ_G0026061	Srsf6	53	35.443	MGP_WSBEiJ_G0034856	Rbmx	77	35.443