EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0026154 (Gene tree)
Gene ID: -
Gene Symbol: Stau1
Alias: 5830401L18Rik|AW549911|C85792|Stau
Full Name: staufen (RNA binding protein) homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 54654 bases
Position: chr2:171284262-171338915
Accession: 1338864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0058308	dsrm	PF00035.26	1.2e-26	1	2
MGP_WSBEiJ_P0058308	dsrm	PF00035.26	1.2e-26	2	2
MGP_WSBEiJ_P0058305	dsrm	PF00035.26	1.2e-26	1	2
MGP_WSBEiJ_P0058305	dsrm	PF00035.26	1.2e-26	2	2
MGP_WSBEiJ_P0058309	dsrm	PF00035.26	1.3e-26	1	2
MGP_WSBEiJ_P0058309	dsrm	PF00035.26	1.3e-26	2	2
MGP_WSBEiJ_P0058307	dsrm	PF00035.26	2.3e-23	1	2
MGP_WSBEiJ_P0058307	dsrm	PF00035.26	2.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0058310	-	774	-	-	- (aa)	-	-
MGP_WSBEiJ_T0058311	-	1513	-	MGP_WSBEiJ_P0058311	436 (aa)	-	-
MGP_WSBEiJ_T0058312	-	862	-	-	- (aa)	-	-
MGP_WSBEiJ_T0058313	-	826	-	-	- (aa)	-	-
MGP_WSBEiJ_T0058307	-	2976	-	MGP_WSBEiJ_P0058307	495 (aa)	-	-
MGP_WSBEiJ_T0058306	-	3573	-	-	- (aa)	-	-
MGP_WSBEiJ_T0058305	-	3568	XM_006499071	MGP_WSBEiJ_P0058305	489 (aa)	XP_006499134	Q9Z108
MGP_WSBEiJ_T0058309	-	2860	-	MGP_WSBEiJ_P0058309	487 (aa)	-	-
MGP_WSBEiJ_T0058308	-	2840	-	MGP_WSBEiJ_P0058308	485 (aa)	-	-
MGP_WSBEiJ_T0058314	-	788	-	-	- (aa)	-	-
MGP_WSBEiJ_T0058315	-	341	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0026154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0026154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0026154	Stau1	52	31.395	MGP_WSBEiJ_G0025129	Prkra	53	31.395
MGP_WSBEiJ_G0026154	Stau1	86	48.055	MGP_WSBEiJ_G0015270	Stau2	84	48.046