EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0026201 (Gene tree)
Gene ID: -
Gene Symbol: Rbm38
Alias: Rnpc1|Seb4|Seb4l
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 12836 bases
Position: chr2:177877540-177890375
Accession: 1889294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0058491	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0058494	-	1527	-	-	- (aa)	-	-
MGP_WSBEiJ_T0058493	-	440	-	MGP_WSBEiJ_P0058493	125 (aa)	-	-
MGP_WSBEiJ_T0058492	-	620	-	MGP_WSBEiJ_P0058492	107 (aa)	-	-
MGP_WSBEiJ_T0058491	-	1639	-	MGP_WSBEiJ_P0058491	237 (aa)	-	-
MGP_WSBEiJ_T0058490	-	2280	-	-	- (aa)	-	-
MGP_WSBEiJ_T0058489	-	936	XM_006499923	MGP_WSBEiJ_P0058489	78 (aa)	XP_006499986	Q62176

Gene Model

Click here to download MGP_WSBEiJ_G0026201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0026201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0026201	Rbm38	63	91.837	MGP_WSBEiJ_G0019838	Rbm24	100	68.067
MGP_WSBEiJ_G0026201	Rbm38	77	35.484	MGP_WSBEiJ_G0016882	Dazap1	86	35.802
MGP_WSBEiJ_G0026201	Rbm38	70	38.095	MGP_WSBEiJ_G0018283	Msi2	73	37.349
MGP_WSBEiJ_G0026201	Rbm38	51	36.364	MGP_WSBEiJ_G0028968	Hnrnpd	51	36.364
MGP_WSBEiJ_G0026201	Rbm38	66	46.809	MGP_WSBEiJ_G0029148	Msi1	61	51.064
MGP_WSBEiJ_G0026201	Rbm38	74	38.043	MGP_WSBEiJ_G0016876	Cirbp	78	40.476