EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0026790 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 13730 bases
Position: chr3:94290119-94303848
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0061127	RRM_1	PF00076.22	9.2e-54	1	3
MGP_WSBEiJ_P0061127	RRM_1	PF00076.22	9.2e-54	2	3
MGP_WSBEiJ_P0061127	RRM_1	PF00076.22	9.2e-54	3	3
MGP_WSBEiJ_P0061126	RRM_1	PF00076.22	1.5e-53	1	3
MGP_WSBEiJ_P0061126	RRM_1	PF00076.22	1.5e-53	2	3
MGP_WSBEiJ_P0061126	RRM_1	PF00076.22	1.5e-53	3	3
MGP_WSBEiJ_P0061128	RRM_1	PF00076.22	1.9e-53	1	3
MGP_WSBEiJ_P0061128	RRM_1	PF00076.22	1.9e-53	2	3
MGP_WSBEiJ_P0061128	RRM_1	PF00076.22	1.9e-53	3	3
MGP_WSBEiJ_P0061133	RRM_1	PF00076.22	6.8e-16	1	1
MGP_WSBEiJ_P0061134	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0061129	-	1193	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061128	-	1485	-	MGP_WSBEiJ_P0061128	494 (aa)	-	-
MGP_WSBEiJ_T0061127	-	2356	-	MGP_WSBEiJ_P0061127	416 (aa)	-	-
MGP_WSBEiJ_T0061126	-	2749	-	MGP_WSBEiJ_P0061126	465 (aa)	-	-
MGP_WSBEiJ_T0061125	-	365	XM_006502323	MGP_WSBEiJ_P0061125	31 (aa)	XP_006502386	Q8CIN6
MGP_WSBEiJ_T0061137	-	855	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061130	-	669	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061131	-	2446	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061132	-	2937	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061133	-	779	-	MGP_WSBEiJ_P0061133	182 (aa)	-	-
MGP_WSBEiJ_T0061134	-	726	-	MGP_WSBEiJ_P0061134	231 (aa)	-	-
MGP_WSBEiJ_T0061135	-	3374	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061136	-	889	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0026790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0026790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0026790	Celf3	98	35.632	MGP_WSBEiJ_G0032466	Elavl1	95	44.444
MGP_WSBEiJ_G0026790	Celf3	67	32.857	MGP_WSBEiJ_G0026082	Pabpc1l	57	34.118
MGP_WSBEiJ_G0026790	Celf3	91	39.474	MGP_WSBEiJ_G0034510	Rbms3	76	39.474
MGP_WSBEiJ_G0026790	Celf3	81	87.368	MGP_WSBEiJ_G0034019	Celf6	75	85.526
MGP_WSBEiJ_G0026790	Celf3	100	69.072	MGP_WSBEiJ_G0023480	Celf4	97	65.971
MGP_WSBEiJ_G0026790	Celf3	63	32.877	MGP_WSBEiJ_G0017782	-	81	35.632
MGP_WSBEiJ_G0026790	Celf3	77	37.805	MGP_WSBEiJ_G0030144	Tia1	93	38.667
MGP_WSBEiJ_G0026790	Celf3	90	55.801	MGP_WSBEiJ_G0024598	Celf2	94	83.333
MGP_WSBEiJ_G0026790	Celf3	98	35.632	MGP_WSBEiJ_G0033593	Elavl3	89	34.940
MGP_WSBEiJ_G0026790	Celf3	80	37.500	MGP_WSBEiJ_G0022441	Pabpc6	72	36.585
MGP_WSBEiJ_G0026790	Celf3	63	41.975	MGP_WSBEiJ_G0027657	Elavl2	76	41.975
MGP_WSBEiJ_G0026790	Celf3	61	40.741	MGP_WSBEiJ_G0027789	Elavl4	85	40.741
MGP_WSBEiJ_G0026790	Celf3	99	43.830	MGP_WSBEiJ_G0025390	Celf1	97	43.320
MGP_WSBEiJ_G0026790	Celf3	100	66.848	MGP_WSBEiJ_G0016950	Celf5	100	65.032
MGP_WSBEiJ_G0026790	Celf3	70	34.091	MGP_WSBEiJ_G0032221	Tial1	81	37.333