EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0026861 (Gene tree)
Gene ID: -
Gene Symbol: Rbm8a
Alias: 2310057C03Rik|AA673428|Rbm8
Full Name: RNA binding motif protein 8a
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 3870 bases
Position: chr3:96683932-96687801
Accession: 1913129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0061488	RRM_1	PF00076.22	5.2e-18	1	1
MGP_WSBEiJ_P0061487	RRM_1	PF00076.22	5.5e-18	1	1
MGP_WSBEiJ_P0061489	RRM_1	PF00076.22	5.5e-18	1	1
MGP_WSBEiJ_P0061487	RRM_3	PF08777.11	3.7e-06	1	1
MGP_WSBEiJ_P0061489	RRM_3	PF08777.11	3.8e-06	1	1
MGP_WSBEiJ_P0061488	RRM_3	PF08777.11	8.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0061487	-	2618	-	MGP_WSBEiJ_P0061487	173 (aa)	-	Q9CWZ3
MGP_WSBEiJ_T0061488	-	2767	-	MGP_WSBEiJ_P0061488	171 (aa)	-	-
MGP_WSBEiJ_T0061489	-	2592	-	MGP_WSBEiJ_P0061489	174 (aa)	-	-
MGP_WSBEiJ_T0061491	-	560	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061490	-	464	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0026861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0026861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0026861	Rbm8a	100	97.701	MGP_WSBEiJ_G0016249	Rbm8a2	100	97.701
MGP_WSBEiJ_G0026861	Rbm8a	54	35.870	MGP_WSBEiJ_G0030144	Tia1	77	35.870
MGP_WSBEiJ_G0026861	Rbm8a	62	32.000	MGP_WSBEiJ_G0032466	Elavl1	74	32.000
MGP_WSBEiJ_G0026861	Rbm8a	62	30.693	MGP_WSBEiJ_G0027789	Elavl4	54	33.784
MGP_WSBEiJ_G0026861	Rbm8a	58	32.353	MGP_WSBEiJ_G0027657	Elavl2	59	33.784
MGP_WSBEiJ_G0026861	Rbm8a	57	31.313	MGP_WSBEiJ_G0034856	Rbmx	73	32.000